Gene Paes_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0313 
Symbol 
ID6460356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp336668 
End bp338020 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content53% 
IMG OID642724309 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002015017 
Protein GI194333157 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0935149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA ACGTTGATAT ACTTGTTATA GGCGGCAGCG CGGCTGGAAT TGTTGCGGCT 
ACGACCGCGA GAGCTTTTTA CCCGGATAAA GCGGTCATGA TTGTACGTAA GGAGCAGAAA
GCAGTGGTGC CTTGCGGGAT TCCTTACATC TATGGGACGC TGAAGAGCAT TGAGCAGAAT
ATTATTCCAG CAGGTCATAT TACCGATGCC GGTGTTGAGA TGATGATCGA CGAAGTCGTC
AGCATCGACA GCGAGAAGAA AACTGCGACG ACGGTTTCAG GTACGGTGAT TTCCTGGGAC
AAGCTGGTTA TTGCTACAGG ATCGGTACCT AAGGTGCCGG GCTGGTTGAA AGGGACTGAC
CTCGATAACG TCTTTACCAT TCCGAAGGAT TGCCAATACC TCGATCATGT GCAGCATGCG
ATGGAGGGAA GCAGGAAAGT GGTGATTATC GGTGGTGGAT TTATAGGGGT GGAAATCGCT
GATGAACTGA GCAAGAAAGG GCTTGATATC ACGTTGGTCG AGTTGTTGCC GCATGTGCTG
CAGATGGCCT TTGACGAGGA GATGTCGGTT CGTGCCGAAG AGATCCTGAC GACGTCAGGC
GTGAAGCTCA AACTCGGCTG CAAGGTTGAG GAGATCGAAG GCGATGGCAA GGTGACTGGC
GTGCGACTCG ATGGAGGAGA GGTGCTTGAG GCTGATCTGG TGATTTTGTC CACCGGTTAT
CTTCCCAATA CGACCCTTGC CGCCGATGCG GGCATCAAGC TTAACGAGCT GGGGGCTATC
CGGGTTGACG AGTACATGCG CACCGAAAAC AAGGATATCT TCGCTGTCGG TGATTGCGCG
GAGAAGTTCT CTTTCTTTAC CCGCATTGTG AAGGGCCTCA TGCTGGCTTC CACCGCTTGT
TCTGAAGCGC GTATCGCAGG TATGAATCTC TACAAGCTTT CCCGCTTGAG AACATTCGGC
GGTACCCTGT CGATTTTCTC TACCGCTATC GGCGGAACGA CCTTTGCTGC TGCCGGTGTG
ACGGAGCAGA TGGCGATTGA ACGGGGATTT GATATCGTCA GCGCTTCTGC TGAAGGGATC
GACAAGCATC CGAAAACTCT TCCGGGCGTT CACGCTCAGC GGGTCAAGCT GATTGTCAAC
CGTGAATCCG GTCTGGTACT CGGCGGTTCA GTGATCGGTG GAGTGAGCGC GGGAGAGCTG
ATCAATGTTA TCGGGGTGAT TATCGAGAGT ATGATGACGA TTCACCAGGT ACTGACGCTC
CAGCTCGGAA CCCATCCTCT TCTTACAGGT CCACCGACCG GCTATCCGTT GCTGAAAGCT
GCTGAAAACG TAGCGAAGAA GATGCGGCAA TAG
 
Protein sequence
MQKNVDILVI GGSAAGIVAA TTARAFYPDK AVMIVRKEQK AVVPCGIPYI YGTLKSIEQN 
IIPAGHITDA GVEMMIDEVV SIDSEKKTAT TVSGTVISWD KLVIATGSVP KVPGWLKGTD
LDNVFTIPKD CQYLDHVQHA MEGSRKVVII GGGFIGVEIA DELSKKGLDI TLVELLPHVL
QMAFDEEMSV RAEEILTTSG VKLKLGCKVE EIEGDGKVTG VRLDGGEVLE ADLVILSTGY
LPNTTLAADA GIKLNELGAI RVDEYMRTEN KDIFAVGDCA EKFSFFTRIV KGLMLASTAC
SEARIAGMNL YKLSRLRTFG GTLSIFSTAI GGTTFAAAGV TEQMAIERGF DIVSASAEGI
DKHPKTLPGV HAQRVKLIVN RESGLVLGGS VIGGVSAGEL INVIGVIIES MMTIHQVLTL
QLGTHPLLTG PPTGYPLLKA AENVAKKMRQ