| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0311 |
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| Symbol | |
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| ID | 6460365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 331973 |
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| End bp | 336091 |
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| Gene Length | 4119 bp |
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| Protein Length | 1372 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642724307 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_002015015 |
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| Protein GI | 194333155 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.220801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAC CCTCCGAACA TAAAACCGTC CAGTCCCGAA TCCTCGCATA CGCCGAGGCC
ATCGGCTGGA CCGTTGTATT TCGTGAGGAA GCGGAGAAAC GGAGGGCGGG TTTTCCAACC
CGCCATTACA TTCCAACAGG AACAGTAACG GAAGGTTTTC CAACCCGCCA TTACATTCAA
TGTGGCAAGC AAGAAAATGG CGGACAGGAA TGTCCGCCCT CCGTTAAATC ATTGTCCCTT
TTCTTCGACG ACCTGCTTGA CGCGAAGGTT CGGGAGTTCA ATCCTTGCTA TGCCGAGGCG
GAAGGAGCGT TGCTTGGGCA GTTCCGGCAT TTGCATGCTG ACATCTACGG CAATCGGGAG
TTCGTGGAGC ATCTGCGTAA CCGGGGGAAG TTCTTCGATC ACGAGGAGAA GCGGGAGCGC
GACCTGATCC TGATCGATTA CGAGAATCCT GAGCGGAACG TGTACGAAGT GACCGAGGAG
TGGGCCTATC ATAACGGGCA GTACGGTACT CGCGAGGATA TTGTCTTTCT CGTCAACGGC
ATTCCCGTGC TGATGATCGA GTGCAAGAAT GCCACCAGGG ATGAGGCGAT TGCTTTGGGG
ATAGACCAGA TCCGCCGTTA CCATCGCGAG ACACCAGAAC TGTTCGTTCC CCAGCAGCTT
TTCACCGTTA CCGATGCCAT CGGCTTTTCG TATGGAGCCA CTTGGAACAC CGTGCGCCGT
AACATCTTCG AGTGGAGAAC GGAGGGCGGA CTTTCCAGTC CGCCATTACA TTCTGATGTG
AATGAAGGAC TTTCCAGTCC GCCATTACAT TCTGAATTGG AAAGCGGATC AGAAAATTCG
CCATTGCATG TGAAAAGAAA AGAGGGGGGA AATGGCGGGT TGGAAAACCC GCCCTCCTTT
CTTGACCCGG AGAGAGAGAT TGGCATGACG CTGCGTCGGT TGCCGCATTG GCAGCAGGGT
GATGTGTGGG TCTTTGTGAC ATGGCGGCTG GCGGATTCTC TGCCACAGTC GAAACTGGAG
GAGTGGAAAG AAGAGCGGGA GATCTGGCTT TCGAAACATC CTGAGCCATG GGATGAGAAA
ACCGAAGAAG AGTATCATGA ACGCTTTTCG CGTCAGATCG ACGATTGGCT CGATCAGGGC
CGTGGTTCGT GTCTGCTAAA AGATCCTGAA AATGCGCAGA TCGTTGCCGA TGCGTTACGG
CATTTTGACG GAGAACGCTA TCAGCTGGCT TCGTTCGTGG TGATGCCGAA TCATGTGCAC
GTGTTGTTCT GTCCGTCCGG AACGCATTCG CTCGCCGGGA TTCTGAAATC CTGGAAGGGA
TTCAGCGCCC GTGAGATCAA CAAGCGATCG GGAAAGACGG GATCGTTCTG GCAGGAAGAG
TATTGGGACC GTTTGATTCG AAGTGAGAAG CACTTTTTCA GGGTGGCAAA GTACATCCGT
GAGAATCCAA TAAAGGGGGG CGGGTTTTCC AACCCGCCAT TACATTCTTA TTTTGAAAGA
GGATTAGAAA ACCCGCCATT ACATTCTGAT GTGAATGCAG GACTTTCCAA CCTGCCATTC
TATTACGAAT GCGAATTGCT GTTCGGAAAA AATGGCGGAC AGGAATGTCC GCACTCCGTT
GAAGATAATG GCGGGTTTGA AAACCCGCCC TCTTTTCAAG AAAAGGCCAG GCTGGAAGCA
TTGCCATTAC AGTCAAAAGA AGTTCAAGAA AATGGCGGAC AGGAATGTCC GCCCTCCTTT
CCCGGTCGTC TTGAGGCCAA GGTCAAAACC TTCTGCGCTA TCCCGCAGGT GCTCGCCTTC
CTGAAGGAGT ACATTGTCTT TGCCGAAAAG GACGAGGAGC TGAACAAGTA CATTCTGCGC
CAGCACCAGA CCGGTGCGGT GGATGCATCC GTCAATCGGG CACTTGATCC TGTCCGTTCC
CGTGGTCTCG TCTGGCATAC GCAGGGGAGC GGCAAGACCT TCACGATGAT CAAGGCGGCT
GAACGGCTCT TTCGTGCGCC AGAGGCAGAC AAGCCGACCA TCCTTCTGAT GATCGACCGC
AACGAGCTGG AAGACCAGAT GCTCAAGAAT ATCTCCGCGC TCGGTTTGGG CAATCTGGAG
CATGCAGGAA GCATCAAGCG GCTCAACAAA CTGTTGCGTG ACGACTATCG GGGCATCATC
GTCACGATGA TCCACAAGTT CCGGGATATG CCGGGGAATA TCAATACCCG GTCGAACATC
TACGTCCTGA TCGACGAAGC ACACCGTACT ACAGGCGGCG ATCTTGGCAA CTACCTCATG
GCCGGTCTGC CCAACGCCAC CTTCATCGGT TTTACCGGTA CGCCGGTGGA CAAGACCGTT
TACGGTAAGG GCACCTTCAA GACCTTCGGC TGCGAGGACG ACAAAGGGTA TCTGCACAAG
TATTCCATCG CCGACAGCAT CGAGGACGGC ACCACGCTGC CGCTATACTA CCAGCTTGCG
CCCAACGACA TGCTCGTCCC GCACGAGACA CTGGACAAGG AGTTTCTCTC CCTTGTCGAA
GCTGAGGGAG TCGCTGACAT CGAAGAGTTG AACAAAATTC TCGACCGGGC AGTGAACCTG
AAGAACTTTC TCAAAGGCAG GGAACGGATC AAGAAAGTCG CGCAGTTTGT TGCAGGGCAC
TACCTCGCCA ACGTCGAACC TCTCGGCTAC AAGGCTTTCC TTGTCGGGGT AGACAGGGAG
GCCTGCGCCC ACTACAAGCA GGCCCTCGAC CAGTTCCTGC CGTCCGATTA TTCCCGGGTG
GTCTACACCG GCAACAATAA CGACTCCGTC CTGCTCAAGA AATTTCATCT CGACCAGAAA
CAGGAACGGC AGATCCGCAA AAGCTTCGGC AAACTCGCAG AGCAGCCGAA GATTCTCATC
GTCACCGAGA AACTTCTTAC CGGATTCGAT GCGCCTCTGC TCTACGCCAT GTATCTCGAC
AAGCCGATGC GCGACCATAC CCTGTTGCAG GCCATCGCAA GGGTAAACCG TCCCTACGAG
AACGAAGCGC AGGAGATGGT AAAGCCCCAC GGTTTTGTGC TCGATTTTGT CGGCATTTTC
GACAAACTCG AAAAAGCTCT TGCCTTCGAC AGCAAGGAGA TCAACGCCAT CGTCAAGGAT
ATCAGTCTTC TGAAGGCACT CTTCAAAAGC AAGATGGAGG CTATAGGAGG GCGGACTTTC
CAGTCCGCCA TTGGATTACA AACGGCGAAC AGAGGAAACG GGCATTGGAT TTCGAATGAG
GATTCTGAAT GTAATGGCGG ACTGGAAAGT CATGAGGATA AATGTAATGG CGGACTGGAA
AGTCCGCCCT CCTTTACGTT CAATGATAGG GATGTCGATA ATCTGATCGA GCATTTCCGT
GATCCGGAGC GGCGGAAAGC GTTTTTCAGG GAGTACAAGG AGATCGAGAT GCTCTACGAG
ATCATCTCAC CGGATGCGTT TCTCCGGCCA TTTATTGACA ACTATGCGAT GCTTTCGGCA
ATCTACAATG TGGTTAGCAA GGCCTATACG AAGCGCATTC AGGTCGATCG TGATTTCCAG
CGCAAGACCA GCATGCTGGT GCAGCAGCGG GTCGGCAGTT ACGGAGTCGG AGAGTTGCAG
GGCGTGGTGA AAATAGATGC GAACGCCATC GACATCATCA ATGCCCAGGC TGGCGGGGGC
GTAACGAAGG TGATCAATCT TATCAAGAGT ATTGAAAAGA TCGCGGAGGA GCAAAGCGAC
GATCCGTTTC TGATCGCCAT GGCCGAAAGA GCACAAGCCG TGCAGGAGCG TTTCGAGAAC
CGCCAGACCA CGACAGCCGA AGCCCTGGGA AAGCTTATCC AGGAGGTCGA GGCCAACGAG
GCCCGCAAAA AAGAGCAGGC GGAAAAAGGA TTTGACGGAC TGACTTACTT CGTCTACCGG
ACGCTGCTCG ACGAGGATAT AAATAATCCC GAAGAGGTCA GCCGGAAGAT CAAGGCGGTA
TTTCTGGAAT ATCCCAACTG GCAGAAAAGC GGCGCGGCAA TGCGTGAGCT GCGAAAAAAG
ATCACTTTTG CGCTTTTTAC TCAATCGGAC GACCTTGACC GGGTCACTGG CATTGTGGAC
GCCCTGTTCA GTTTGCTGGA ACGGGCAAAC GGGATTTGA
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| Protein sequence | MPTPSEHKTV QSRILAYAEA IGWTVVFREE AEKRRAGFPT RHYIPTGTVT EGFPTRHYIQ
CGKQENGGQE CPPSVKSLSL FFDDLLDAKV REFNPCYAEA EGALLGQFRH LHADIYGNRE
FVEHLRNRGK FFDHEEKRER DLILIDYENP ERNVYEVTEE WAYHNGQYGT REDIVFLVNG
IPVLMIECKN ATRDEAIALG IDQIRRYHRE TPELFVPQQL FTVTDAIGFS YGATWNTVRR
NIFEWRTEGG LSSPPLHSDV NEGLSSPPLH SELESGSENS PLHVKRKEGG NGGLENPPSF
LDPEREIGMT LRRLPHWQQG DVWVFVTWRL ADSLPQSKLE EWKEEREIWL SKHPEPWDEK
TEEEYHERFS RQIDDWLDQG RGSCLLKDPE NAQIVADALR HFDGERYQLA SFVVMPNHVH
VLFCPSGTHS LAGILKSWKG FSAREINKRS GKTGSFWQEE YWDRLIRSEK HFFRVAKYIR
ENPIKGGGFS NPPLHSYFER GLENPPLHSD VNAGLSNLPF YYECELLFGK NGGQECPHSV
EDNGGFENPP SFQEKARLEA LPLQSKEVQE NGGQECPPSF PGRLEAKVKT FCAIPQVLAF
LKEYIVFAEK DEELNKYILR QHQTGAVDAS VNRALDPVRS RGLVWHTQGS GKTFTMIKAA
ERLFRAPEAD KPTILLMIDR NELEDQMLKN ISALGLGNLE HAGSIKRLNK LLRDDYRGII
VTMIHKFRDM PGNINTRSNI YVLIDEAHRT TGGDLGNYLM AGLPNATFIG FTGTPVDKTV
YGKGTFKTFG CEDDKGYLHK YSIADSIEDG TTLPLYYQLA PNDMLVPHET LDKEFLSLVE
AEGVADIEEL NKILDRAVNL KNFLKGRERI KKVAQFVAGH YLANVEPLGY KAFLVGVDRE
ACAHYKQALD QFLPSDYSRV VYTGNNNDSV LLKKFHLDQK QERQIRKSFG KLAEQPKILI
VTEKLLTGFD APLLYAMYLD KPMRDHTLLQ AIARVNRPYE NEAQEMVKPH GFVLDFVGIF
DKLEKALAFD SKEINAIVKD ISLLKALFKS KMEAIGGRTF QSAIGLQTAN RGNGHWISNE
DSECNGGLES HEDKCNGGLE SPPSFTFNDR DVDNLIEHFR DPERRKAFFR EYKEIEMLYE
IISPDAFLRP FIDNYAMLSA IYNVVSKAYT KRIQVDRDFQ RKTSMLVQQR VGSYGVGELQ
GVVKIDANAI DIINAQAGGG VTKVINLIKS IEKIAEEQSD DPFLIAMAER AQAVQERFEN
RQTTTAEALG KLIQEVEANE ARKKEQAEKG FDGLTYFVYR TLLDEDINNP EEVSRKIKAV
FLEYPNWQKS GAAMRELRKK ITFALFTQSD DLDRVTGIVD ALFSLLERAN GI
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