| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0310 |
|---|
| Symbol | |
|---|
| ID | 6460368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 329921 |
|---|
| End bp | 331960 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642724306 |
|---|
| Product | protein of unknown function DUF87 |
|---|
| Protein accession | YP_002015014 |
|---|
| Protein GI | 194333154 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.724586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.179177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC AACCAACACT TTTGGGCCAC GTCGGCGCGG TGTCGGGAGC CAAGATCAGT
GTGCGACAGT CACCAGCAGT CGCTTCTGGT ATTTCGATCA TCGGTGGAAA GAGCTACAAA
ATCGGACAGG TTGGAAGTTT TGTAAGGATT CCGCAAGGCT ACAACGATCT CTACGGCCTT
GTTTCCGAAG CTGGAGCCAA CGCGACGCCC GATGCGCTAT TGGGCTCGGC TAGCGGGGGG
AGTGAGCGAT GGATTACCGT GCAGTTGGTA GGCGAGATCA TGGGTACCTC CTTCGAACGA
GGGATAAGCC AATATCCCAA CGTTAATGAT GAAGTTCATC TCGTCACAGA AAGTGATCTT
GAAGCGATTC ATGGGGTCGA AGAACAAGGA CAGGTCGTCG TAGGGCGTTT GGCGAGTGCG
GACGGTATCC CCGTAAAACT CGATTTGGAT AAGCTTGTCA CCCGTCACAG TGCTGTCCTT
GGTTCAACGG GTTCGGGAAA ATCTACTACA GTTGCGAGCC TACTCAGATC CATAGTGTCC
GGAGCAGACG GGAGTGACGC TGGGTTCCCG AGTTCGCGTA TCCTTCTGCT TGATATTCAT
GGCGAGTATT CACATGCCTT GTCCGACGTC GCAAAAGTCT TCAGAATTAG TCCAGAAGCG
AATCAAACGC AGCTGCACAT TCCGTTCTGG GCGCTCGATC CAAACGAGTT GTTGTGTTTT
TTGATGGGAC GACTTGACGA TAAGCCGCTC ACGGCCATTC TGGATAAAGT CTACGAGTAC
AAACACGATC AGGCGGTGGC GCATCCGCGT GCAGGTCTGA ACGTTACGTC GATGACATCC
GATACTCCCG TGCCATTTAG CCTCAAAAAG CTTTGGCTAG AGTTGCTAGA GCCGGAAGTG
AAAACTTGGG AAGACACTGC ACGTTCACAA CCAGCTCTAT TGGAGGCGGG GAATGCAGAC
AACGTTACGC CGCCCCAATA CAAGCCACAC GGAGCAGGTG CTACTCCCCC GTTCATTAAC
CAGATTGGCG TTTTGGGTAT TCGACGCCCG TTGGATCAGT TGAGATCAAG GTTACTCGAC
AAAAAGTATG ACTTTTTGCT TCATCCCGGA GATTGGGAAC CTGACCTAGA TGGGAACGTC
ACGAAGGACC TCGATGCTCT TCTGGAGGAG TGGTTGGGTC ATGACAAACC AATTACCATA
TTGGATTTAT CCGGAGTTCC GAGTCTTGTC TTGGAGCAAC TAATCGGCGC GATTCTTCGA
ATTCTTTACG AAGCCCTATT TTGGGGGAGG GATCGATCTG AGGGTGGCAT CGCTCGTCCT
CTGCTCGTTG TGATGGAGGA AGCACATCGC TATCTTTCAA AAGATGCGAA TGGGCCGTCG
CGATCAATGG TTCAGCGCAT CGTTAAAGAA GGTCGGAAAT TTGGCGTTGG GGCGATGATA
GTCAGCCAAC GACCGACTGA GGTCGACGAA ACGATTCTCT CCCAATGCGG CACTTTTGTC
GCCATGCGCC AGACGAATTC TGCCGACCGA AGTAAGGTGC AGGCTTCTTT GCCGGATAAT
TTGGCAGGCA TTGTTGATAG TCTTCCAGTT CTACGAACAG GCGAGGCGGT CATTACAGGC
GAGGCGGCAC GACTCCCTGT TCGATGTCGC ATCTCGCTTC CTCCCGAAGG ATCAAGACCA
AATAGCGAAG ACCCGGAAGT TGCCAAGGCG TGGGTGGCTG ATCGGCGTCC CGAGAGTTAC
GAACGTCTCG CCGCTTCATG GCGCGCCCAG AATCCGCGAT GGGCAGCAAT CAGAGTTACC
AGAACAACAA TACATCAGGA GCAAGTTGAA GCTATGGAAA GAGAGCCTGT CACATCGTCA
AATGTCGTAT CAGTTGGTTA CGATGCCAAT AAAGAGACAC TGGAAATCGA ATTTAAGAAC
GGTGTCTACC AATACTACAA CGTCCCTCAG CCGATTTACG ATCAGATGAT GATGTCAGAG
TCTGTCGGCA AGTTCCTAAA CGTTTATATC AAGCCGATGT ATCCGTGCGC TAAAGTATAA
|
|---|
| Protein sequence | MKIQPTLLGH VGAVSGAKIS VRQSPAVASG ISIIGGKSYK IGQVGSFVRI PQGYNDLYGL
VSEAGANATP DALLGSASGG SERWITVQLV GEIMGTSFER GISQYPNVND EVHLVTESDL
EAIHGVEEQG QVVVGRLASA DGIPVKLDLD KLVTRHSAVL GSTGSGKSTT VASLLRSIVS
GADGSDAGFP SSRILLLDIH GEYSHALSDV AKVFRISPEA NQTQLHIPFW ALDPNELLCF
LMGRLDDKPL TAILDKVYEY KHDQAVAHPR AGLNVTSMTS DTPVPFSLKK LWLELLEPEV
KTWEDTARSQ PALLEAGNAD NVTPPQYKPH GAGATPPFIN QIGVLGIRRP LDQLRSRLLD
KKYDFLLHPG DWEPDLDGNV TKDLDALLEE WLGHDKPITI LDLSGVPSLV LEQLIGAILR
ILYEALFWGR DRSEGGIARP LLVVMEEAHR YLSKDANGPS RSMVQRIVKE GRKFGVGAMI
VSQRPTEVDE TILSQCGTFV AMRQTNSADR SKVQASLPDN LAGIVDSLPV LRTGEAVITG
EAARLPVRCR ISLPPEGSRP NSEDPEVAKA WVADRRPESY ERLAASWRAQ NPRWAAIRVT
RTTIHQEQVE AMEREPVTSS NVVSVGYDAN KETLEIEFKN GVYQYYNVPQ PIYDQMMMSE
SVGKFLNVYI KPMYPCAKV
|
|---|
| |