| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0290 |
|---|
| Symbol | |
|---|
| ID | 6458743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 310413 |
|---|
| End bp | 311759 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642724286 |
|---|
| Product | acetyl-CoA carboxylase, biotin carboxylase |
|---|
| Protein accession | YP_002014994 |
|---|
| Protein GI | 194333134 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0124015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTCA AGAAAATACT AATTGCAAAT CGCGGTGAAA TTGCTTTGCG CATCATGCAG
ACCTGCCGTG AACTGGGAAT CAGTACGGTC GCCATCTACT CGACTGCCGA TAAAAATTCC
CTTCATGTCA AGTATGCCGA CGAAGCCGTC TGCATCGGCC CGCCCCTCGG AAAAGAAAGC
TACCTGAACA TCCCGCGGAT CATGGCCGCT GCAGAGATCA CCAATGCTGA CGCGATTCAT
CCCGGCTATG GATTCCTTGC TGAAAATGCT GATTTCGCAG AAGTGTGCAA TGCCTCGGGA
ATTAAATTTA TCGGTCCGAC CGCAGAGATG ATCCGCAAAA TGGGCGATAA AAACAGTGCC
AAGGAAACCA TGATCGCTGC TGGCGTCCCT GTCATTCCCG GAAGTGACGG GTTGGTAAGG
GATACAGCCC ATGCACTCAA AACTGCTGAA AAAATAGGCT ACCCTGTAAT CATTAAGCCA
ACGGCAGGAG GCGGTGGAAA AGGAATGCGG GTGGTAAACG AACCGGAAAA AATCCAAAAA
GCTCTCCTTA CCTCCCAGAA CGAAGCCCAA CAGGCTTTCG GTAACAGCGG AGTCTATATT
GAAAAGTTCG TAGAAAGTCC GCGCCATGTT GAAATACAGA TCCTCGCCGA CCAGCATGGC
AATACGATGC ATCTGGGTGA AAGAGACTGT ACCATTCAAC GTCGTCATCA GAAACTCATC
GAAGAGACTC CCTCACCGGT TGTCGACGAA GCGCTCCGCA ATGAGATGGG CAATGCCGCT
GTTGCCGCTG CAAGCGCTAT CAATTATGAA GGCGCTGGAA CCATAGAATT TCTGCTCGAC
AGCGACCGCA AATTCTACTT CATGGAAATG AATACCCGTA TACAGGTTGA ACATCCTGTA
ACGGAGGAAC GCTATGATGT CGATCTGGTC AAGGAACAGA TTCTTGTCGC TTCCGGCGAG
TCCATTGCCG ATAGGAAATA CCGGCCGAAA GGACATTCAA TTGAATGCAG AATCAATGCC
GAGGATCCGG AACACGGATT CAGACCAAGT CCCGGTGAAC TCCAGGTGTT TCATACGCCC
GGCGGTTATG GTGTCCGTGT CGACTCTCAC GGCTACGCAA GCTACAAGAT CCCGTCGAAT
TACGACTCCA TGGTAGCCAA GCTTATTGTC ACGGCCCATT CAAGAGAAGA GGCTATAGCA
AGAATGCTCA GGGCCCTGGA TGAATTCATC GTTGTCGGGA TAAAAACCAC CATTCCTTTT
CATAAGCAGC TCTTGCAGAC TGAAGAGTTC AGAAGCGGGA ACTACGACAC CCACTTTCTG
GAAACCTTTA CCTTCAAAAA AACTTAG
|
|---|
| Protein sequence | MLFKKILIAN RGEIALRIMQ TCRELGISTV AIYSTADKNS LHVKYADEAV CIGPPLGKES
YLNIPRIMAA AEITNADAIH PGYGFLAENA DFAEVCNASG IKFIGPTAEM IRKMGDKNSA
KETMIAAGVP VIPGSDGLVR DTAHALKTAE KIGYPVIIKP TAGGGGKGMR VVNEPEKIQK
ALLTSQNEAQ QAFGNSGVYI EKFVESPRHV EIQILADQHG NTMHLGERDC TIQRRHQKLI
EETPSPVVDE ALRNEMGNAA VAAASAINYE GAGTIEFLLD SDRKFYFMEM NTRIQVEHPV
TEERYDVDLV KEQILVASGE SIADRKYRPK GHSIECRINA EDPEHGFRPS PGELQVFHTP
GGYGVRVDSH GYASYKIPSN YDSMVAKLIV TAHSREEAIA RMLRALDEFI VVGIKTTIPF
HKQLLQTEEF RSGNYDTHFL ETFTFKKT
|
|---|
| |