Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0284 |
Symbol | rplK |
ID | 6460673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 299396 |
End bp | 299821 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642724280 |
Product | 50S ribosomal protein L11 |
Protein accession | YP_002014988 |
Protein GI | 194333128 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0080] Ribosomal protein L11 |
TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000380764 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00371909 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAA AGGTAGTTGG GTTTATTAAG TTGCAAATTC CGGCAGGCGG CGCTAATCCT GCCCCTCCCG TAGGTCCTGC GCTTGGTCAG AAAGGCGTGA ATATCATGGA GTTCTGTAAG CAGTTCAATG CTAAGACCCA GTCTCAGGCA GGAACTATCA TTCCTGTTGT GATTACGGTT TTCTCCGACA AATCATTCAC CTTCATCACC AAGACTCCTC CTGCGGCAGT TCTCCTTATC AAGGAGGCCG GTCTTCAGAA GGGATCTGGA GAGCCGAACA AGAACAAGGT CGGTACCGTG TCTAAAGAGC AGGTGCGCAA GATCGCCGAA TTGAAGATGC CTGATCTTAA TGCAGTTGAC GTCGAAGGCG CTATGCAGAT GGTCATGGGT ACAGCGAGAA GTATGGGGAT CGTCGTCGAG GATTGA
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Protein sequence | MAKKVVGFIK LQIPAGGANP APPVGPALGQ KGVNIMEFCK QFNAKTQSQA GTIIPVVITV FSDKSFTFIT KTPPAAVLLI KEAGLQKGSG EPNKNKVGTV SKEQVRKIAE LKMPDLNAVD VEGAMQMVMG TARSMGIVVE D
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