Gene Paes_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0272 
Symbol 
ID6460768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp284397 
End bp285260 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content53% 
IMG OID642724264 
Productprotein of unknown function DUF52 
Protein accessionYP_002014976 
Protein GI194333116 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00648873 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000150956 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGAAA ACGTTCGATA CCCTGCAGTA GCAGAATCTT TTTACCCGTC CGACCGGGAA 
GAACTTGACA CGTTTCTTGA ATCGATACTT TCTGAATCAA CGGCAACAAA CAACAGTGAG
AAGGCCTCAA TACGCGCACT GCTTGTCCCC CATGCCGGCT ATGCCTTCAG CGGCAGGGCA
TCGGCTGAAG CCTACAGCCG GCTCGCCGGC AACCAATACA GAACGGTCTT CATCCTCGGT
AACGCCCATG CGTATCGGTT TAACGGCATT GCGCTTGATA CGCACCATAT CTGGCAGTCC
CCGCTTGGTC GTATTCCGAT AAACATGGAC GCCGCCGAAC AGTTCAGAAC AGCAGCCCCT
CGCCTTATCG ACTATCTCGA TATCGCCCAT CATTCGGATC ATGTTCTTGA AGTGCAGCTG
CCGTTTCTCC AGAAAACCCT GAAAACAGGC TTTTCGATTC TCCCTATCCT GTTTGGTGAA
AACGCAAAGG ATATCTCCCT GAAAACAGCT CGTATACTCA GCGATATTCT GCAGCCTGAC
GACCTTCTCA TTGCCAGCAG CGACCTTTCC CACTACCCGT CGTATGACGA TGCCAATGCT
ATTGACAGAA AAACACTTGA TGCTATCGTC AATATCGACA TGAAAGGCCT CGAGCGCCAT
GTTCGAAACA CCATGAAACA GAACGTTGCC CATGAAGACG CTCTCTTCTG CGGTCCGGAC
GGACTCAAAA CCCTGCTGCG CATCGCCACC CAAAGAGGCT GGACAGCAGA GGAACTGGCG
TACTGCAACA GCGGCGATGC CGAGTGGCGG GACCGCGACG CCGTTGTCGG CTACGGATCG
GTGGCTTTTT ATGAGCCTCA GTAG
 
Protein sequence
MNENVRYPAV AESFYPSDRE ELDTFLESIL SESTATNNSE KASIRALLVP HAGYAFSGRA 
SAEAYSRLAG NQYRTVFILG NAHAYRFNGI ALDTHHIWQS PLGRIPINMD AAEQFRTAAP
RLIDYLDIAH HSDHVLEVQL PFLQKTLKTG FSILPILFGE NAKDISLKTA RILSDILQPD
DLLIASSDLS HYPSYDDANA IDRKTLDAIV NIDMKGLERH VRNTMKQNVA HEDALFCGPD
GLKTLLRIAT QRGWTAEELA YCNSGDAEWR DRDAVVGYGS VAFYEPQ