| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0251 |
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| Symbol | hemE |
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| ID | 6460619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 261092 |
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| End bp | 262147 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642724242 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002014955 |
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| Protein GI | 194333095 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.821676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.456057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAA ATGATCTTTT TCTTCGGGCG TTGAAGCGGC AGCCGGTTCC AAGGACTCCG
ATCTGGGTGA TGCGGCAGGC AGGCCGATAT CTGCCTGAGT ACCGCGCAAT CAGAGAAAAA
ACTGATTTTC TGACCCTGTG TAAAACCCCT GAACTGGCTG CAGAAGTCAC TATTCAGCCT
GTGGATATCA TTGGGGTTGA TGCGGCTATC ATTTTCTCGG ATATCCTTGT TGTCAACGAA
GCTATGGGCA TGGATGTTCA GATCATAGAG ACCAAAGGTA TCAAACTGAC CCCTCCGATC
CGTTCTCAGG TTGATATTGA TCGCCTCATT ATTCCTGATA TCGAAGAGAA ACTTGGCTAT
GTTATGGATG CTATCCGTCT GACCAAGAAA GAGCTCGATA ACAGGGTTCC TCTTATCGGC
TTTTCCGGTG CTGCATGGAC GCTCTTTACC TATGCTGTTG AGGGTGGGGG ATCGAAGAAT
TACGCTTTTG CCAAGAAAAT GATGTATCGT GAGCCACAGA TGGCCCACAT GCTTTTGAGC
AAGATCTCTC AGGTTATTAC CGAGTACCTG CTTATGCAGG TTGAGGCAGG AGCTGACGCG
CTTCAGATTT TTGATTCATG GGCAAGTGCT CTTTCTGAAG ATGACTATCG TGAGTTCGCC
CTTCCTTATA TCAAGGAAAG CGTTCAGGCT ATCAAAACCA AATATCCCGA TATTCCGGTT
ATTGTGTTCT CTAAAGATTG CAATACCATT CTTTCCGATA TTGCTGATAC AGGCTGTGAT
GCTATGGGCC TCGGCTGGAA CATGGATATT GCAAAAGCCC GCAAAGAACT TCAGGACCGT
GTCTGTATTC AGGGTAATAT GGATCCGACA GTTCTCTACG GTACCCATGA TAAAATCAAA
GCGGAAGCCG CTAAAATTCT CAAGCAGTTT GGTCAGCATA CCGCAGAGTC CGGTCATGTC
TTCAATCTTG GTCACGGTAT TCTTCCTGAT GTTGACCCGG CAAATCTCAA ATGCCTGGTT
GATTTTGTCA AGGAAGAGAG CCCGAAATAC CACTGA
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| Protein sequence | MLKNDLFLRA LKRQPVPRTP IWVMRQAGRY LPEYRAIREK TDFLTLCKTP ELAAEVTIQP
VDIIGVDAAI IFSDILVVNE AMGMDVQIIE TKGIKLTPPI RSQVDIDRLI IPDIEEKLGY
VMDAIRLTKK ELDNRVPLIG FSGAAWTLFT YAVEGGGSKN YAFAKKMMYR EPQMAHMLLS
KISQVITEYL LMQVEAGADA LQIFDSWASA LSEDDYREFA LPYIKESVQA IKTKYPDIPV
IVFSKDCNTI LSDIADTGCD AMGLGWNMDI AKARKELQDR VCIQGNMDPT VLYGTHDKIK
AEAAKILKQF GQHTAESGHV FNLGHGILPD VDPANLKCLV DFVKEESPKY H
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