Gene Paes_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0197 
Symbol 
ID6460772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp202462 
End bp203598 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content53% 
IMG OID642724190 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002014903 
Protein GI194333043 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGTC CGGGATCCTC TACAAATGTA AAAAAGCTTT CAACGGTGAA AAAAATTCTT 
TTGGCATCCG GAGACAATTC CGGTCTGCTG CGCACTCTTC CACTCTACCG TAGATTACAG
GCCAGTACAA GCTGTGAGGC GGTCATCGCC GGAGCAACCG GCCCTCATGA AGAGGACCTT
TCTTCACTGT TCGAGATATC GGATTCGTTT ATCACAATAG CGGTTGGCCA AGGTTCGGTC
GTCGAAAAGA CTGCATTGGC CCTGACCGGT TTTGCCGATA TCATGGTCCG TGAAAAACCC
GACCTGGTCA TCGTTGCAGG CGAAAATGAC ATATCTCTTG CAGCAGCACT CTCCTCTTCC
CGTCTCGGTC TTCCTTATGC AAGTCTCGAA GCCGGTATGC GCAGTTACAA CCGGAACGCT
CCGCGAGAAG CAAACCGTCG CCTTATCGAT GCCGCCGCTG ATATGATGTT TGTCAGCGAA
CACAGCGGGA CCTACAATCT GATCAGCGAA GGATCCGACG AAGAGCGGAT ATTCTTTGTC
GGAAACATGC TTATCGATGC GCTGGCGTTG AAGATCGCCG ATTCCAACAG TTCGTCCATC
ATTCAGGAAC TCGGCTATAC ATCCAAGCAG TACGCTCTGG TGCGTCTCGA ATGTTTGCCA
GCGGTTGACA CCCTCGAAGC GATCAGGAAG GTAGAACGCC TTGTCGGTGT CATCGCCGCA
ACGCATCCTG TACTTCTGCA GCTTGCGCCC GACGTCAATG CGCTCATAGA GCAGCATGCA
ATGCTCTCAG CCTTCACCTC AATCGACGGT GTGACCGTCA GACCTCCGGC AGGCTATGTT
GACCAGCTTC GACTGATCAA GGACGCCGTG TTCATTCTGA CCGACACCCG CGATATGCAG
GCCGAAGCCA CCGTCATGAA AGTTCCATGT CTAACCATGA GCAGCGACAC CACAAGCCCC
GCTTCCATCG AAATCGGCAC CAACATGCTC GTCGGTACAG AAGAGGACGA TATTCTCATG
CGTATCCAGG ATGCCCTTGA AGGCAAACTC GCAAAGCACG CGAAAATCCC GGAAAAATGG
GACGGTGCAG CCGCTCAGCG AGTCGTCGAG GTGCTGGAAA AGGTGTTGGC CGGGTAA
 
Protein sequence
MICPGSSTNV KKLSTVKKIL LASGDNSGLL RTLPLYRRLQ ASTSCEAVIA GATGPHEEDL 
SSLFEISDSF ITIAVGQGSV VEKTALALTG FADIMVREKP DLVIVAGEND ISLAAALSSS
RLGLPYASLE AGMRSYNRNA PREANRRLID AAADMMFVSE HSGTYNLISE GSDEERIFFV
GNMLIDALAL KIADSNSSSI IQELGYTSKQ YALVRLECLP AVDTLEAIRK VERLVGVIAA
THPVLLQLAP DVNALIEQHA MLSAFTSIDG VTVRPPAGYV DQLRLIKDAV FILTDTRDMQ
AEATVMKVPC LTMSSDTTSP ASIEIGTNML VGTEEDDILM RIQDALEGKL AKHAKIPEKW
DGAAAQRVVE VLEKVLAG