Gene Paes_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0189 
Symbol 
ID6460725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp196485 
End bp197489 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID642724182 
ProductNa+/Ca+ antiporter, CaCA family 
Protein accessionYP_002014895 
Protein GI194333035 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCTG ATGTCATGAA TCACATAGGC CTGTCCGGTA ATATCGCCAT CCTCGGCGTG 
AGCGGCCTTC TGCTCTTCAT TGGGGCAGAA TGGCTTATCC GGGGCAGTGT CGATCTGGCT
GGAAAATTCG GCATCAAACC GTTCGTGATC GGTCTCACGG TAGTGGCCTA CGGCACATCT
ATGCCGGAGT TTGTCGTCAG CTTCTTCGCT CATGTCGTTG AAGATTCGGA TAGCATTTCA
CTGGGCAACG TCATCGGCAG CAACATCACC AATATCGGTC TTATCCTCGG CCTCAGCGCC
CTGATCTTCC CTATCCACAT CGCATTTCAA AGCATTCGCA ACCAGTCGCT GTTTCTGTTC
GGCATCAGCA TGATCGTCTA TCTCCTCGCC CTTGACGGAA CCATCTCCCG GGCGGAGGGA
GGCGTGCTCT TCACGCTGCT CTGCGGCTAC CTGTTCGTCA TGTACCGTAC CCCTGAAATT
GCTGAAGAAT CATTTGAAGA GGCACCCGAA AGTCAGGATA TACTGCCCCT TGCAACAAGC
ATCTCGCTTG TCGGTGCTGG AAGTGTTCTG CTTTCAACAG GGGCGTGGTC TTTTGTCAAA
AGCTCGGTAT GGATTGCCGA ACAGCTCAAT ATCCCTAAGC TCTACATCGG GCTTTCTATC
GTCGCTCTCG GAACCTCGCT GCCGGAGCTG GCGACATCGC TAGTAGGGGC TATCCGGAGA
GAGAGCGAGA TCTCTGTCGG CAATCTTATC GGAAGCAATA TCTTTAACAT TCTCTTCGTG
CTGGGAGGGG TCAGCATGAT CAAACCCGTT TCGGTTATCG AGCCGCTCCT TGCCGATGCA
GCAATCACCC CATCGTTTCC CCACATGCAG TTTCTGATCA TGATCGCGTT CGGACTGCTC
CTGCTCCCGA TGAGTTTTCA CCGCAATATC ATCGGACGAT GGTCGGGCTT CACCCTGCTA
TGCTGCTACG GATTGTTTTA CTGGCAGCTC TTTAGCGCAG AGTGA
 
Protein sequence
MLPDVMNHIG LSGNIAILGV SGLLLFIGAE WLIRGSVDLA GKFGIKPFVI GLTVVAYGTS 
MPEFVVSFFA HVVEDSDSIS LGNVIGSNIT NIGLILGLSA LIFPIHIAFQ SIRNQSLFLF
GISMIVYLLA LDGTISRAEG GVLFTLLCGY LFVMYRTPEI AEESFEEAPE SQDILPLATS
ISLVGAGSVL LSTGAWSFVK SSVWIAEQLN IPKLYIGLSI VALGTSLPEL ATSLVGAIRR
ESEISVGNLI GSNIFNILFV LGGVSMIKPV SVIEPLLADA AITPSFPHMQ FLIMIAFGLL
LLPMSFHRNI IGRWSGFTLL CCYGLFYWQL FSAE