Gene Paes_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0173 
Symbol 
ID6458394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp181607 
End bp182851 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content53% 
IMG OID642724165 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_002014879 
Protein GI194333019 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG AAAGAAAAAA AATAGTGATT ACCGGTGTAG GGCTACTCTC TCCGGTTGGC 
CTGTCAAAGC AGGAACTCTG GGAATCCCTG TCCATGGGAA AAAGCGGCGC TGCGCCTATA
ACCTATTTTG ACGCAACAAA CTTCGCGACA CGCTTTGCCT GTGAACTGAA AGGGTTCAAC
GCGACTGATT ATATCGACCA GAAATCAGCC GGAAGAATGG ACCCCTTCTG CCAGTATGCT
GTTGCCGCTT CCGACCAGGC CCTGAAAGAT TCAGGGCTTG ATGTATCATC GATCGACAAG
GCAAGAATCG GTGTCGTCTA CGGTTCAGGA ACGGGAGGCA TGACAACGCA TGACCAGCAG
ATGCGAGTCT ATCTCGAACG CGGTCCGAGA AGGATCAGTC CGTTTTTTAT CCCGATGCTT
ATCCCCGATA TTGCCGCTGG TCAGATCGCG ATGCGACACG GGCTCATGGG ACCGAACTAC
GCGACGGCAT CCGCCTGCGC CACCTCGCTC CACGCGATTA TGGACGCATG GATGCTTATG
CAGATGGGAA TGGCCGACTA CATGGTCTGT GGAGGTTCTG AAGCTGCTAT CACGCCGATG
AGTGTAGCAG GATTCAACGC CGCACGCGCA CTGTCAACAG CCAATGACAA CCCGACAACT
GCCTCCCGCC CTTATGACAA GGATCGAGAC GGCTTTGTTA TGGGAGAAGG TGCCGGTGCA
CTGGTACTGG AAACACTGGA ATCAGCGCAG GCACGCGGCG CAACAATTTA CGGCGAAATA
GCAGGTGTCG GCGCTTCTGC CGATGCACAT CACCTGACAG CACCCCACCC GGAAGGGTTA
GGAGCAGTCA ACGCGATGAA CTGCGCCTTG CAGCAGGCAG GCATAACGCC CGATAAAATT
GATTACATCA ATACGCATGG CACTGCGACC CCTCTGGGTG ATCTCGCAGA ACTGAAAGCC
ATCAAGACCG TCCTCGGAGA TCATGCCAAA ACAGTCAGCA TCAGTTCGAC AAAATCAATG
ACCGGTCACC TGCTTGGTGC CGCAGGTGTC GTCGAATCGA TCATCTGTCT TCTGGCCATG
AAAAACCAGA TCGTACCGCC GACGATCAAC CTCGACAATC TCGACCCTGA AATCGATGTC
GATGTTACTC CGAATACGCC TAAAGAAAAA AATCTGGAAT ACGTGCTGAA CAATGGTTTT
GGTTTCGGCG GTCATAATGC AACGCTGATT TTCAAAAAAA TCTGA
 
Protein sequence
MSQERKKIVI TGVGLLSPVG LSKQELWESL SMGKSGAAPI TYFDATNFAT RFACELKGFN 
ATDYIDQKSA GRMDPFCQYA VAASDQALKD SGLDVSSIDK ARIGVVYGSG TGGMTTHDQQ
MRVYLERGPR RISPFFIPML IPDIAAGQIA MRHGLMGPNY ATASACATSL HAIMDAWMLM
QMGMADYMVC GGSEAAITPM SVAGFNAARA LSTANDNPTT ASRPYDKDRD GFVMGEGAGA
LVLETLESAQ ARGATIYGEI AGVGASADAH HLTAPHPEGL GAVNAMNCAL QQAGITPDKI
DYINTHGTAT PLGDLAELKA IKTVLGDHAK TVSISSTKSM TGHLLGAAGV VESIICLLAM
KNQIVPPTIN LDNLDPEIDV DVTPNTPKEK NLEYVLNNGF GFGGHNATLI FKKI