Gene Paes_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0170 
Symbol 
ID6459496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp178499 
End bp179014 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content48% 
IMG OID642724162 
ProductHNH endonuclease 
Protein accessionYP_002014876 
Protein GI194333016 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAC ACAAATCAAA AGTTCTCATA CTCAACAGCA GCTATGAACC ACTGAGTATA 
TGTGACGCGC AAAAAGCGAT CGTTCTGCTT TTCTGCGGAA AGGCAGTGAC CGTTGCCCAG
CATCCGGACC AGGTAATCCG CACGGTAAAG GAATCCTATC CCCTGCCCTC CATCGTACGT
CTTACTTTTT TCGTCAGGGT CCCCTATAAA AAGCTCATGC TCAGCAGAAA AAACATCTTC
AGACGCGACA ACTTTCAGTG CCAGTACTGT GGCCGTAAAG AGCGGCTTCT GACAATCGAC
CATGTGCTTC CCCGTTCAAA AGGAGGCGAA GAATCCTGGG AAAACCTCAT TACCGCCTGC
AGCAGCTGCA ACACAAAAAA AGGCAACCGG ACACCGGAAG AAGCCGGAAT GCCCCCGCTG
AACCAGCCTA TCCGTCCCAG TCACATCATG CTAATGCGAA AATTTATTAC TACTATATCA
GAAGACTGGA AACCCTATTT ATTCATGAGC CGTTAA
 
Protein sequence
MPLHKSKVLI LNSSYEPLSI CDAQKAIVLL FCGKAVTVAQ HPDQVIRTVK ESYPLPSIVR 
LTFFVRVPYK KLMLSRKNIF RRDNFQCQYC GRKERLLTID HVLPRSKGGE ESWENLITAC
SSCNTKKGNR TPEEAGMPPL NQPIRPSHIM LMRKFITTIS EDWKPYLFMS R