| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0166 |
|---|
| Symbol | infC |
|---|
| ID | 6460662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 172301 |
|---|
| End bp | 172894 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642724158 |
|---|
| Product | translation initiation factor IF-3 |
|---|
| Protein accession | YP_002014872 |
|---|
| Protein GI | 194333012 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
|---|
| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.805148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA AGAGAAGCGC TCCTCAAAAG CCAAAACTAA CCTACAGGGT CAATGAGCAG
ATCCGTGTTC CTGAGGTAAG AGTTGTTTTC AAGGATGGTT CACAGGAAAT CCTGAAAACC
GGCGAAGCCA GAAAAATGGC TGAACAGGAG GGACTTGATC TCATTGAAGT ACAGCCTACG
GCACAACCCC CTGTCTGCAA AATGGACAAC TACGGTAAAC TGCAGTACAA GCTGGATAAA
AATGAAAAGG ACCGTAAGAA AAAGTCGAAA CCCACAGAGT TAAAGGAGCT TCGCTTTCAT
CCAAATACGG ACACACACGA CTTCGACTTC AAGTCGGCGC ACCTTGAAGA GTTTCTCCGC
AAAGGCAACA GGGTCCGAGC CACCATTGTC TTTCTCGGTC GCTCTATTAT CTACAAAGAT
AAAGGGTTCG AGCTCGTCGA GCGCCTTAAG GAACGCCTGA GCAACGTGAG CAACCCCGAG
GGTGAAGCAA AATTCGAAGG AAAACGGCTT TTTATCTATT TCGAACCCGA TAAAAAGAAA
ATCGAAATCT TCGAAAGACA GTTAGCAAAA ATGAAACCGG AAGAAAAGCC GTAA
|
|---|
| Protein sequence | MRKKRSAPQK PKLTYRVNEQ IRVPEVRVVF KDGSQEILKT GEARKMAEQE GLDLIEVQPT
AQPPVCKMDN YGKLQYKLDK NEKDRKKKSK PTELKELRFH PNTDTHDFDF KSAHLEEFLR
KGNRVRATIV FLGRSIIYKD KGFELVERLK ERLSNVSNPE GEAKFEGKRL FIYFEPDKKK
IEIFERQLAK MKPEEKP
|
|---|
| |