| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0164 |
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| Symbol | rplT |
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| ID | 6459199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 171697 |
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| End bp | 172044 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642724156 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_002014870 |
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| Protein GI | 194333010 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.202979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAGAT CGAAAAATGC AGTTGCATCA CGTGCGAGAA AAAAACGGAT TTTAAATAAA
GCGAAGGGTT ACTGGGGTTC ACGCGGTACT ATTCTGACCG TTGCCAAACA CGCTGTCGAT
AAAGCAGAAC AGTATGCCTA CCGTGACAGA AGGGTCAAGA AGAGAACCTT CCGTGCGCTC
TGGATCATGC GTATCAATGC CGCTGCCCGT CTGAACGGAA CATCCTATTC GCGTCTGATG
GAGGCAATGC ATAAGAAAAA CATCGATATC AATCGCAAAG CGCTTGCAGA GATCGCAGTA
AAAGACCCGT CTGCGTTCAG CCAGATCGTC AAAACAGCTA TGGATTAA
|
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| Protein sequence | MPRSKNAVAS RARKKRILNK AKGYWGSRGT ILTVAKHAVD KAEQYAYRDR RVKKRTFRAL
WIMRINAAAR LNGTSYSRLM EAMHKKNIDI NRKALAEIAV KDPSAFSQIV KTAMD
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