Gene Paes_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0157 
Symbol 
ID6459642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp167281 
End bp168057 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content53% 
IMG OID642724149 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_002014863 
Protein GI194333003 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00989742 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CTACTTGGAA CGTCAACGGG ATCAGGGCGA GAAAATCAGC GCTCTACGAC 
TGGGTTGTCG GGACGATGCC TGATATCCTG ATTCTCCAGG AACTCAAGGC TGACGAGGAG
AGTATCCCCG ATGAGATTCT GTCGCTTGAG GGATATAGCA AATTCTGGAA CGGTTCGACC
TTTAAAAAAG GCTATAGCGG GGTCGGCATG CTTGTTCGTG ACGATCTCAA CGGCAACGAC
GGGTGCTATC ACTATGAGAT TCCTGATTTT GATATCGAGA ACCGGACCGT TGTTCTGCAC
GGCCGGGGAT TTTCCCTGAT CGGGACCTAT GTGCCGAGGG GCGAGGGGGA TGCGCACTAT
GGGGTTAAGC TGAACTATCT GGAAGGCGTA GCGACCTATA TCGGCGGACT GCTTGATGAA
GGGAGGGAAA TTATTCTGAC GGGCGATATG AATGTTGCCC ATACCGCTCT CGATGTGCAC
CATTCTCAGA ACAAACCCGG TGCTGTCGGG CTCAGGGCGG AAGAACGATC AGCTCTGGAC
CGTCAGTTGC AACTCGGTCT GCACGATATT ATGCGGGAAC GACATCCCGG AAGAGAGGGA
CTCTATACCT GGTGGCCTTA CTGGAAAGGA GCACGAGAGC GTAATCTCGG CTGGCGTATC
GATTGCTTCT ATCTCTCCGG AGGACTGCTC AGCCAAGTTC AGGATGTCGT TGTCGATATC
GAGGAAAAAA GCTCGGACCA TGCCCCGGTG ATTCTCGATA TTCTGGCTCT TTCATGA
 
Protein sequence
MKIATWNVNG IRARKSALYD WVVGTMPDIL ILQELKADEE SIPDEILSLE GYSKFWNGST 
FKKGYSGVGM LVRDDLNGND GCYHYEIPDF DIENRTVVLH GRGFSLIGTY VPRGEGDAHY
GVKLNYLEGV ATYIGGLLDE GREIILTGDM NVAHTALDVH HSQNKPGAVG LRAEERSALD
RQLQLGLHDI MRERHPGREG LYTWWPYWKG ARERNLGWRI DCFYLSGGLL SQVQDVVVDI
EEKSSDHAPV ILDILALS