| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0154 |
|---|
| Symbol | |
|---|
| ID | 6460329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 165279 |
|---|
| End bp | 165677 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642724146 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_002014860 |
|---|
| Protein GI | 194333000 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0376255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGGT ATACTTTTTT TCTCCCGATG AGTGTAAGGG ACTACGAGTG CGATATTCAG
GGGATCGTTA ACAACAGCGT TTATCAGAAT TATCTCGAAC ATACACGTCA CGAGTATCTT
AAATCGGTCG GTATCGATTT CAAGGCTTAT GCTTTAGAGG GCATTAATCT TGTCGTTGTT
CGCGCGGAAC TGGATTATCG GTTCCCGCTC GAAAGCGGTG ATGCTTTTCT TGTCGGTCTG
AACCTGACGC GAACGTCGCG GTTGAAGTTT ACATTTCATC AGGATATCTA TCGTGAGCGG
GACCGCAGAC TGATTCTGAA TGCAAAAATT ACCGGCACCG CCCTCAATGA GCGGGGGCGT
CCGGAGATAC CTCCGGCGCT TGATCGTCTT ATGGCGTAA
|
|---|
| Protein sequence | MDGYTFFLPM SVRDYECDIQ GIVNNSVYQN YLEHTRHEYL KSVGIDFKAY ALEGINLVVV
RAELDYRFPL ESGDAFLVGL NLTRTSRLKF TFHQDIYRER DRRLILNAKI TGTALNERGR
PEIPPALDRL MA
|
|---|
| |