Gene Paes_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0144 
Symbol 
ID6459391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp154863 
End bp156203 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content54% 
IMG OID642724137 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_002014851 
Protein GI194332991 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.174095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG ATCATCAGGC AAATGCAGAA ATAACCCGGC TGCCGAAGGA ATTCCTTGAT 
CGGCTTGCCA AACCCTTTAC GCACTTCCTG CACATCGAAG CTGCCGGCGG AGCGATTCTT
CTCCTGTTCA CGGTTGCTGC ACTGGTTCTT TCGAACTCAC CGTGGGCTCA CATGTTTGAA
CAAGCATGGA AAACCAAAAT AGGGCTTCAA CTTGATTCGC TGGAGTATGC ACGTTCTCTG
CGAGAGTGGA TCAACGATGG TTTGATGACG CTTTTTTTCT TTCTTGTCGC GTTAGAGCTC
AAGCGAGAGT TGGTTCTCGG CGAGTTGAAC AAACCGCGCA TGGCGATGCT GTCAATTTCT
GCCGCTCTGG GAGGGATGAT CTTTCCAGCG GCAATCTATC TGACTCTGCA ATCAGGACAA
CCCGGTGAGC ATGGCTGGGG CACCGTCATG GCTACCGACA CGGCATTTGT TATCGGCTGC
ATGGCTCTTC TGGGATCGCG CATTCCTCAA AGCTTACGGG TGTTTATGCT CTCATTGGCG
ATCGTTGACG ATATCGGCTC CATTCTGGTC GTCGCTATCG GATACAGCAG CAACATTTCA
TGGGGAGCGT TGGCTGTTGC GGCTCTTGGC GTCGTAATCG TGCGTGCGAT AGCAATGCTG
GGCTTCCGCA GTTTTCCACC CTACATCCTG ATCGGCGGGA TGATCTGGCT TGCTATTGAT
ACGTCCGGAA TACATGCAAC CATCACCGGA GTAATACTCG GGTTAATGAC ACCTGCGAGG
CGCTGGGTCA GTGCCGATCG TTTATACGCC ATATTGGACC AGGTCGTTGC GCATCCACAT
GGCGGCGCCC GGGGCAGCGC AGACACAAAG GATCGGCAGA CCTTGCAGGT AGCCGAAATT
GCCGCACGCG AAACGCTCTC TCCTGTCGAA CGCCTTGAGA TTGCGCTCCA CCCATGGATC
GGCTTTTGTA TCATGCCGCT GTTTGCATTT GCCAACGCCG GTTTACCACT ATCGTTGAGC
GATCTCGGCA ACTCGGTCAG CATCGCGGTT TTTGCAGGTT TCGTACTCGG CAAACCTCTT
GGCATTCTGT CCTTCAGCTG GCTGGCAGTG CGCACGCACA TCGCCATGCG TCCACCGGAA
CTCAGTTGGA GACTGATCGC TGGCGGCAGC CTTCTCGGCG GAATCGGCTT CACCATGGCG
CTGTTTATTG CCAATATAGC GTTCGACAAC AGTGTGATCA CCAGCGCCAA ACTTGGGATC
TTCCTCGCAT CCATCTTTTC CGCAACCGCA GGTCTCTCAA TGTTGAGATG GTTCCCTGCA
TCCGGCAAAC CCGCTCAATA A
 
Protein sequence
MTTDHQANAE ITRLPKEFLD RLAKPFTHFL HIEAAGGAIL LLFTVAALVL SNSPWAHMFE 
QAWKTKIGLQ LDSLEYARSL REWINDGLMT LFFFLVALEL KRELVLGELN KPRMAMLSIS
AALGGMIFPA AIYLTLQSGQ PGEHGWGTVM ATDTAFVIGC MALLGSRIPQ SLRVFMLSLA
IVDDIGSILV VAIGYSSNIS WGALAVAALG VVIVRAIAML GFRSFPPYIL IGGMIWLAID
TSGIHATITG VILGLMTPAR RWVSADRLYA ILDQVVAHPH GGARGSADTK DRQTLQVAEI
AARETLSPVE RLEIALHPWI GFCIMPLFAF ANAGLPLSLS DLGNSVSIAV FAGFVLGKPL
GILSFSWLAV RTHIAMRPPE LSWRLIAGGS LLGGIGFTMA LFIANIAFDN SVITSAKLGI
FLASIFSATA GLSMLRWFPA SGKPAQ