Gene Paes_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0137 
Symbol 
ID6459175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp142313 
End bp144793 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content53% 
IMG OID642724125 
ProductDNA gyrase, A subunit 
Protein accessionYP_002014844 
Protein GI194332984 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCG ATAAAATTCT GCCGATCAGT ATTGAAGAGG AAATGAGGGG TGCCTACCTC 
GATTATTCGA TGTCGGTTAT TGTCAGCCGC GCGTTACCCG ATGTACGTGA TGGATTGAAG
CCGGTTCACC GGAGAGTGCT GTACGGTATG CATGAACTGG GCCTTCAGGC TGGAAAGCCT
TATAAGAAGT CAGCGCGTAT CGTCGGTGAG GTGCTTGGTA AGTTTCACCC GCACGGCGAC
AGCGCGGTTT ACGATAGTCT TGTGCGAATG GTGCAGGATT TTTCTCTGCG ATATCCGCTT
ATCGACGGCC AGGGTAACTT CGGTTCTATT GATGGCGACT CTCCGGCGGC TATGCGATAT
ACCGAGGTAC GGATGAAGAG CATTGCAGGC GAGATGCTCA AGGACCTCGA TAAGGAAACG
GTTGATTTTT CGCTCAACTT CGATGACTCG CTTGAAGAGC CCAGGGTGCT TCCTTCCGCG
ATGCCGAACA TGCTTGTCAA CGGCGCCTCA GGTATCGCTG TTGGTATGGC AACCAACATC
CCTCCGCAAA ACCTCAATGA GGTTGTCGGG GGCCTTATCG CCATGATTGA AAATCCTGAG
ATTACCGTTG ACGAGATTAT GGAGCATATT ATTGCGCCTG ATTTTCCGAC CGGCGGTATT
ATCTATGGTT ATGAGGGGGT TAAGCAGGCC TATCGAACGG GACGGGGCAA GGTGGTTATC
AGGGCTCGCG CCGTGGTCGA AGTGACTCAG AAAAACGGCA GGGAATCCAT TGTTGTAACG
GAGCTCCCCT ACCAGGTCAA CAAGGTCAGG CTTATTGAGA AGATCGTCGA TCTGGTTCAT
CAGAAGAAGA TCGAGGGTAT AGCAGATATC CGTGACGAGT CGGACCGGGA CGGTATGCGC
CTGGTTATTG AGCTGAAGCG CGACGCGGTA GCAAAAGTGG TTTTGAATCA TCTCTATAAG
CATACGCCGA TGCAGGATAC CTTCGGCGTC ATACTTCTGG CTCTGGTTGA CGGGGTGCCG
AAGGTGCTGA CGATCAAGGA GATGATGGAA GCCTACATTC TGCACCGCAA CGAGATCGTC
CTTCGCCGGA CCCGCTATGA TCTTTCTGCT GCAGAAAAGA AAGCCCATAT TCTCGAAGGA
CTCAAGATCT GTCTCGATAA CCTCGACGAG GTTATCTCCA CGATCCGCCA GTCGCCGAAC
GCTTCGGTTG CTCAGGAACG CCTTATGGAG CGCTTCGCGC TGACTGAGGT GCAGTCGAAA
GCTATTCTGG AGATGCGCCT CCAGCGTCTG ACAGGCATGG AGCGTTCGAA AATAGATAAC
GATTACAAAG AGACGCTGGC TCACATCGAG GAGCTTCGTT TTATCCTCGC CAATCCCGAG
CGCCAGATGG AGATTATCAA AGAGGAGCTG CTGAGAGTAA AAGCGGTTTT CGGCGACGAG
CGCCGGACTG AAATTGTGCC GCAGGAAGGG GAGTTTTCCA TCGAGGATAT GATTGCCCAG
GAGGATGTGG TTATCACGGT TACCCATGAC GGTTTCATCA AGCGTTTTCC TGTTTCCGGC
TACCGTCGTC AGGCAAGGGG AGGAAAGGGT GTCACCGGGG CTCAGGCCAA GCTGGACGAT
TTCGTGGAGC ATATGTTTAT TGCCTCGACG CACAACTATA TCCTCTTCTT TACCAGCATG
GGGCGTTGCC ACTGGCTGAA AGTGTATGAG ATTCCTGAAG CCGGAAGGAC GGCAAGAGGG
CGTTCGCTGG CCAATATCAT GGAGTTGCAG AAGGGCGAGA CTATTCGTGC CTATATCAAT
GTGAAGACAT TCGACGATCC GCTTTTCATT GTTATGGCTA CAGCCAGAGG GCTCATCAAG
AAAACCGAGA TCGAGGCGTT TTCACGTCCG CGTCGCAATG GTATTGCCGC GATTTCTATC
GAGGACGGCG ATGAGCTGAT CGAAGCGCGT CTGACCGATG GCGAGCATGA CATCATTATG
GCAAAGAACT CCGGATACGC TGTGCGTTTT GCCGAGCGGG ATGTCCGCGC CATGGGACGT
ACGGCCATGG GGGTCAAGGG AATTACTCTC GATGATGACG AGTACTGCAT TTCTATGGTG
ACGTCGAAGC GTTCCGATAC ATCGCTGCTT GCCGTGACGG ATAACGGCTT CGGCAAACGC
AGCCTGGTCG ATGACTACCG CCTTACCCGC AGAGGAGCGC GGGGGGTCAT CACTCTCAAG
GCGCATGAGA AGGTCGGAAA CCTTGTCGGT CTGCTCGATG TCAATGACGG TGACGATCTC
ATCATCATTA CCGCTAATGG TATTGTTAAC CGTCAGCATG TGTCCAATAT CCGCCTGACC
GGTCGTAATA CCTCAGGGGT CAGACTGATT CGCCTTATGC AGGGCGATAA GATTTCCGCT
ACGGCACGGG TGCCGAAAAC CGACGATCCT GATGTTATCG ACGGTCCTGA AGAGCAGATA
GATCTTTTTG GCGACGAGTA G
 
Protein sequence
MQRDKILPIS IEEEMRGAYL DYSMSVIVSR ALPDVRDGLK PVHRRVLYGM HELGLQAGKP 
YKKSARIVGE VLGKFHPHGD SAVYDSLVRM VQDFSLRYPL IDGQGNFGSI DGDSPAAMRY
TEVRMKSIAG EMLKDLDKET VDFSLNFDDS LEEPRVLPSA MPNMLVNGAS GIAVGMATNI
PPQNLNEVVG GLIAMIENPE ITVDEIMEHI IAPDFPTGGI IYGYEGVKQA YRTGRGKVVI
RARAVVEVTQ KNGRESIVVT ELPYQVNKVR LIEKIVDLVH QKKIEGIADI RDESDRDGMR
LVIELKRDAV AKVVLNHLYK HTPMQDTFGV ILLALVDGVP KVLTIKEMME AYILHRNEIV
LRRTRYDLSA AEKKAHILEG LKICLDNLDE VISTIRQSPN ASVAQERLME RFALTEVQSK
AILEMRLQRL TGMERSKIDN DYKETLAHIE ELRFILANPE RQMEIIKEEL LRVKAVFGDE
RRTEIVPQEG EFSIEDMIAQ EDVVITVTHD GFIKRFPVSG YRRQARGGKG VTGAQAKLDD
FVEHMFIAST HNYILFFTSM GRCHWLKVYE IPEAGRTARG RSLANIMELQ KGETIRAYIN
VKTFDDPLFI VMATARGLIK KTEIEAFSRP RRNGIAAISI EDGDELIEAR LTDGEHDIIM
AKNSGYAVRF AERDVRAMGR TAMGVKGITL DDDEYCISMV TSKRSDTSLL AVTDNGFGKR
SLVDDYRLTR RGARGVITLK AHEKVGNLVG LLDVNDGDDL IIITANGIVN RQHVSNIRLT
GRNTSGVRLI RLMQGDKISA TARVPKTDDP DVIDGPEEQI DLFGDE