| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0128 |
|---|
| Symbol | |
|---|
| ID | 6460701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 134575 |
|---|
| End bp | 135900 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642724116 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_002014835 |
|---|
| Protein GI | 194332975 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0306677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TGATCAGAAG CGGGGGAGCG ACTCTGGTGG CTCTGCTTGC AGCCAATACG
GTTATGGCGG CCTCTCCAGA GACAGATTCC GGCACTACGG CCTGGATGCT GACGGCAACA
ACCCTTGTGT TGCTCATGGT CCCTGGTCTG GCAATGTTCT ACGGAGGGCT TGTCAGAACA
AAGAATGTTC TTGGTACGAT GATGCACAGT TTTGCTGCCA TGGTTGTGAT CGGCGTTTTA
TGGCCGACGA TCGGGTATGC ATTGAGTTTC GGTTCCGGTA TTCTCGGCGG TCTCGTCGGA
TGGAATCCTG ACTATGTGCT TCTGAATGGT ATCGATGAGT CGATCATGGA TTCAGGGATT
CCCGAATATG TTTTTGCCAT GTTTCAGGGT AAGTTCGCAA TTATCGCTCC GGCTCTTATT
GCAGGAGCAT TTGCGGAGCG AGTAAGCTTC AGGGGTTATG TTGTCTTTAT CGCCTTGTGG
AGTATTGCCG TCTACAGTCC TATCTGCCAC TGGGTCTGGG CGGAGGACGG TTTTCTGTTT
AACATGGGAC CTGCCGGGGC TATAGATTTT GCCGGCGGTA CTGTCGTTCA TATTTCGTCA
GGTGTCAGTG CGCTTGTTGC CGCTCTTTTT CTCGGCGCTC GGAGAGGCTA TCCTGACAAT
GTCATGCACC CGAACAATCT CGTTATGACT CTGATCGGTG CCGGTCTTTT GTGGGTCGGA
TGGTTTGGCT TTAATGCAGG TAGTGCTGTC GCAAGCGACC TCGATACCGG CAGGGCGCTG
ACCGTTACCC AGATTGCCGC TGCTGCGGGA GCCTCGGCAT GGATGTTGAT TGAGGCGGTT
CTCTATAAAA AAGCAACCAG TCTCGGCGTG GTTTCAGGGA TTCTTGCCGG ACTTGTTGCC
ATTACGCCTG CAGCGGGCGT TGTGCAGCCC GGTGGTGCAA TTATTATCGG TGCTGTTGCA
TCACTTTTCT GTTTTCTTGC TATCCAGGTG AAAAACAAGG CAGGTTATGA CGATAGTCTT
GATGCTTTTG GAATTCATGG TGTCGGTGGT ATTGTCGGTG CTCTTGTCCT CACCTTTTTC
ATTCGTGAGA GCTGGATGGC TGATGCTGCT GTTGCTGCGG GCGGCAGCTG GACGGTCTGG
CAGCAGTTTG GCATACAGGC GGCAGCGGTT GGTGTCACTA TCGTCTATGC GGCAGTGATG
TCTGTCATAC TGCTCTTCCT GGTTGAAAAG ATCGTTGGTT TCCGTCTTGG TGAGACTCAG
GAGATGTCAG GTCTCGATCA CAGCCTTCAT GGTGAGCAGG GCTACGGACT CATCAATCCT
AACTAA
|
|---|
| Protein sequence | MKKLIRSGGA TLVALLAANT VMAASPETDS GTTAWMLTAT TLVLLMVPGL AMFYGGLVRT
KNVLGTMMHS FAAMVVIGVL WPTIGYALSF GSGILGGLVG WNPDYVLLNG IDESIMDSGI
PEYVFAMFQG KFAIIAPALI AGAFAERVSF RGYVVFIALW SIAVYSPICH WVWAEDGFLF
NMGPAGAIDF AGGTVVHISS GVSALVAALF LGARRGYPDN VMHPNNLVMT LIGAGLLWVG
WFGFNAGSAV ASDLDTGRAL TVTQIAAAAG ASAWMLIEAV LYKKATSLGV VSGILAGLVA
ITPAAGVVQP GGAIIIGAVA SLFCFLAIQV KNKAGYDDSL DAFGIHGVGG IVGALVLTFF
IRESWMADAA VAAGGSWTVW QQFGIQAAAV GVTIVYAAVM SVILLFLVEK IVGFRLGETQ
EMSGLDHSLH GEQGYGLINP N
|
|---|
| |