Gene Paes_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0127 
Symbol 
ID6460808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp133899 
End bp134171 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content46% 
IMG OID642724115 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_002014834 
Protein GI194332974 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00042932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTT ACATTGGTAA CCTGCCCTAC AACATCACTG AAGACGACCT TCGTGAAGCC 
TTCAATGAAT TCGGACAGGT AGACAGCGCA AACATCATTA TCGACAAGTT TTCCGGCCGC
TCAAAAGGCT TCGGTTTTGT TGAAATGCCA AATGACGAAG ATGCTGAAAA AGCAATCGAC
TCATTGAACG ACACCGATTT TAATGGCCGC ACCATCAAAG TCAACCAGGC AAGACCCCGC
GAAGAACGTC CTGTACGCAG AGATCGTTAT TGA
 
Protein sequence
MNIYIGNLPY NITEDDLREA FNEFGQVDSA NIIIDKFSGR SKGFGFVEMP NDEDAEKAID 
SLNDTDFNGR TIKVNQARPR EERPVRRDRY