Gene Paes_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0123 
Symbol 
ID6460824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp127407 
End bp129506 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content53% 
IMG OID642724111 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_002014830 
Protein GI194332970 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA ATTTGTTCAA ACCACAAAAT CCTTATAAAA ACGACCCCGA CAACAACAAC 
GAAAAAAAGC CGAAGTTCTC CCTTGTCTAC TATGTCGTTA TCATTCTGAT TCTCGTCGGT
CTCCAGCTGG CATTCTTCTG GTCCGGATCA TCACAGGAGA TCACCTACAG CACATTCCGC
AAGTATATCA CGGAAAACAA AATCGAATCG GTTAAAATCG CACCGGAGCG AATTTACGTC
AAGCTCAAGC CTGGCGTTGT TCCCGTTACC GCCGCAAGTG AAAACGGCAA GGCACCCGCC
ATAGTAAACC CGGAATCATC AAAGGAATCA CAGGACGTCT ATGTCAACCC CGTCCGCGAC
GAAGAGCTCA TCCCGTTGCT TGAAAACCAG GGAATCAGCT ACAAGGGCAT TCCCGGCAAC
AACTGGATCG CTGAACTCCT CCAGTGGATA CTGCCGTTTG GACTCCTGAT AGGCATCTAC
TTCTTTGTCT TTCGCCGGAT GGGCGGACCC GGCTCCCAGT TCATGAATAT CGGCAAAAAC
AAAGCCGCAC TCTACGAAAA CCTCGATGAA CACACAAGGA TCACCTTCAA GGACGTTGCC
GGGCTCGACG AAGCCAAAGG CGAAGTTATG GAGGTCGTCG ATTTCCTCAA GGATCCAAAA
AAATATACCA AGCTCGGAGG CAAGCTGCCG AAGGGGGTAC TGCTTGTCGG CCCTCCCGGA
ACAGGCAAAA CCCTGCTTGC CAAAGCTGTA GCCGGTGAAG CCGATGTACC GTTCTTCAGC
ATCAGCGGGT CCGATTTCGT GGAAATGTTT GTTGGTGTGG GCGCCGCGCG AGTACGCGAC
CTCTTCCGTC AGGCAAAGGA AAAAGCCCCC TGCATCATCT TCATCGACGA GATCGATGCC
GTAGGCCGAA GCCGAGGAAA GGGCGCCATG ATGGGCACAA ATGACGAGCG GGAAAACACC
CTGAACCAGC TGCTGGTTGA GATGGACGGT TTCGCCACCG ACAAAGGGGT CATTCTCATG
GCTGCAACAA ACAGGCCGGA CGTTCTTGAC ACGGCTCTGC TTCGCCCGGG ACGGTTTGAC
CGTCAGATCA TGGTCGACAA ACCTGATCTT AAAGGACGAA TCGACATCCT GAAAGTGCAC
ACCAAAAGCC TTTCGCTCTC GACCGACGTC AACCTTAAAG TGCTTGCCTC CCAGACGCCA
GGCTTTGCCG GCGCCGAAAT CGCCAATGCA GCCAACGAAG CCGCACTCCT TGCATCGCGC
AAGGGGAAAC AGAGCATAGA AATGAAAGAC TTCGAGGATG CGATCGAGAG AGTTGTCGCT
GGTCTTGAGA AGAAAAACAA GGTGATCAAC CCCCAGGAAA AGCGAATTGT CGCCTACCAT
GAAGCCGGTC ACGCCATTAT CAGCTGGCTG CTGGCGGAAA ACGACGCGGT ACAGAAAATA
TCGATCGTAC CGAGAGGCAT GAGCGCGCTT GGCTACACGC TCAACCTTCC GCTCGAAGAC
CGCTATCTTA TGACCAAAAC AGAGCTGTTT TCGAGAATCT GCGGCCTGCT TGGCGGCAGA
ATTGCAGAAG ATATCGTCTT CAATGAAATA TCGACCGGAG CGCAGAACGA TCTGGAAAAG
GTTACAGAAA TCGCCTACAA CATGGTCGTC GTCTACGGCA TGAGCGAAAA ACTCGGCAAC
ATCTCTTACT ATGAGAGCAA CAACCCCTAT TATGGGGGAC CGGGCGTCGA CAAGAAGTAC
AGCGACCACA CCGCCCGACT GATCGATGAA GAGGTCCACG ACACGATCAG CCGCGCAGAA
CAGGCGGTAC GTGAAATTCT CACAAAAAAC CGTGATCGTC TTGAAGCCCT TGCTCAGGAA
CTGCTCCGCA AAGAGGTCGT GCAATACTGC CAGATCGAAG AGATTCTTGG TAAACGACCA
GCCGGCAACG GCCCTGAACA CATTGATCGG GAGTGCGATG AACATGTCGT CCAGGCAGAA
GCAACCGACA CTCCCGCTGA GAAGCAAAGC AATGAAGACC CGGTCAGCAA AGAGGAGCGC
CTGAAGCTGG AAGCTGCTGT CGAAGAGATC CGCAAAAAAA GAGAGAGCAG CGAGTCATAA
 
Protein sequence
MANNLFKPQN PYKNDPDNNN EKKPKFSLVY YVVIILILVG LQLAFFWSGS SQEITYSTFR 
KYITENKIES VKIAPERIYV KLKPGVVPVT AASENGKAPA IVNPESSKES QDVYVNPVRD
EELIPLLENQ GISYKGIPGN NWIAELLQWI LPFGLLIGIY FFVFRRMGGP GSQFMNIGKN
KAALYENLDE HTRITFKDVA GLDEAKGEVM EVVDFLKDPK KYTKLGGKLP KGVLLVGPPG
TGKTLLAKAV AGEADVPFFS ISGSDFVEMF VGVGAARVRD LFRQAKEKAP CIIFIDEIDA
VGRSRGKGAM MGTNDERENT LNQLLVEMDG FATDKGVILM AATNRPDVLD TALLRPGRFD
RQIMVDKPDL KGRIDILKVH TKSLSLSTDV NLKVLASQTP GFAGAEIANA ANEAALLASR
KGKQSIEMKD FEDAIERVVA GLEKKNKVIN PQEKRIVAYH EAGHAIISWL LAENDAVQKI
SIVPRGMSAL GYTLNLPLED RYLMTKTELF SRICGLLGGR IAEDIVFNEI STGAQNDLEK
VTEIAYNMVV VYGMSEKLGN ISYYESNNPY YGGPGVDKKY SDHTARLIDE EVHDTISRAE
QAVREILTKN RDRLEALAQE LLRKEVVQYC QIEEILGKRP AGNGPEHIDR ECDEHVVQAE
ATDTPAEKQS NEDPVSKEER LKLEAAVEEI RKKRESSES