Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0123 |
Symbol | |
ID | 6460824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 127407 |
End bp | 129506 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724111 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_002014830 |
Protein GI | 194332970 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAATA ATTTGTTCAA ACCACAAAAT CCTTATAAAA ACGACCCCGA CAACAACAAC GAAAAAAAGC CGAAGTTCTC CCTTGTCTAC TATGTCGTTA TCATTCTGAT TCTCGTCGGT CTCCAGCTGG CATTCTTCTG GTCCGGATCA TCACAGGAGA TCACCTACAG CACATTCCGC AAGTATATCA CGGAAAACAA AATCGAATCG GTTAAAATCG CACCGGAGCG AATTTACGTC AAGCTCAAGC CTGGCGTTGT TCCCGTTACC GCCGCAAGTG AAAACGGCAA GGCACCCGCC ATAGTAAACC CGGAATCATC AAAGGAATCA CAGGACGTCT ATGTCAACCC CGTCCGCGAC GAAGAGCTCA TCCCGTTGCT TGAAAACCAG GGAATCAGCT ACAAGGGCAT TCCCGGCAAC AACTGGATCG CTGAACTCCT CCAGTGGATA CTGCCGTTTG GACTCCTGAT AGGCATCTAC TTCTTTGTCT TTCGCCGGAT GGGCGGACCC GGCTCCCAGT TCATGAATAT CGGCAAAAAC AAAGCCGCAC TCTACGAAAA CCTCGATGAA CACACAAGGA TCACCTTCAA GGACGTTGCC GGGCTCGACG AAGCCAAAGG CGAAGTTATG GAGGTCGTCG ATTTCCTCAA GGATCCAAAA AAATATACCA AGCTCGGAGG CAAGCTGCCG AAGGGGGTAC TGCTTGTCGG CCCTCCCGGA ACAGGCAAAA CCCTGCTTGC CAAAGCTGTA GCCGGTGAAG CCGATGTACC GTTCTTCAGC ATCAGCGGGT CCGATTTCGT GGAAATGTTT GTTGGTGTGG GCGCCGCGCG AGTACGCGAC CTCTTCCGTC AGGCAAAGGA AAAAGCCCCC TGCATCATCT TCATCGACGA GATCGATGCC GTAGGCCGAA GCCGAGGAAA GGGCGCCATG ATGGGCACAA ATGACGAGCG GGAAAACACC CTGAACCAGC TGCTGGTTGA GATGGACGGT TTCGCCACCG ACAAAGGGGT CATTCTCATG GCTGCAACAA ACAGGCCGGA CGTTCTTGAC ACGGCTCTGC TTCGCCCGGG ACGGTTTGAC CGTCAGATCA TGGTCGACAA ACCTGATCTT AAAGGACGAA TCGACATCCT GAAAGTGCAC ACCAAAAGCC TTTCGCTCTC GACCGACGTC AACCTTAAAG TGCTTGCCTC CCAGACGCCA GGCTTTGCCG GCGCCGAAAT CGCCAATGCA GCCAACGAAG CCGCACTCCT TGCATCGCGC AAGGGGAAAC AGAGCATAGA AATGAAAGAC TTCGAGGATG CGATCGAGAG AGTTGTCGCT GGTCTTGAGA AGAAAAACAA GGTGATCAAC CCCCAGGAAA AGCGAATTGT CGCCTACCAT GAAGCCGGTC ACGCCATTAT CAGCTGGCTG CTGGCGGAAA ACGACGCGGT ACAGAAAATA TCGATCGTAC CGAGAGGCAT GAGCGCGCTT GGCTACACGC TCAACCTTCC GCTCGAAGAC CGCTATCTTA TGACCAAAAC AGAGCTGTTT TCGAGAATCT GCGGCCTGCT TGGCGGCAGA ATTGCAGAAG ATATCGTCTT CAATGAAATA TCGACCGGAG CGCAGAACGA TCTGGAAAAG GTTACAGAAA TCGCCTACAA CATGGTCGTC GTCTACGGCA TGAGCGAAAA ACTCGGCAAC ATCTCTTACT ATGAGAGCAA CAACCCCTAT TATGGGGGAC CGGGCGTCGA CAAGAAGTAC AGCGACCACA CCGCCCGACT GATCGATGAA GAGGTCCACG ACACGATCAG CCGCGCAGAA CAGGCGGTAC GTGAAATTCT CACAAAAAAC CGTGATCGTC TTGAAGCCCT TGCTCAGGAA CTGCTCCGCA AAGAGGTCGT GCAATACTGC CAGATCGAAG AGATTCTTGG TAAACGACCA GCCGGCAACG GCCCTGAACA CATTGATCGG GAGTGCGATG AACATGTCGT CCAGGCAGAA GCAACCGACA CTCCCGCTGA GAAGCAAAGC AATGAAGACC CGGTCAGCAA AGAGGAGCGC CTGAAGCTGG AAGCTGCTGT CGAAGAGATC CGCAAAAAAA GAGAGAGCAG CGAGTCATAA
|
Protein sequence | MANNLFKPQN PYKNDPDNNN EKKPKFSLVY YVVIILILVG LQLAFFWSGS SQEITYSTFR KYITENKIES VKIAPERIYV KLKPGVVPVT AASENGKAPA IVNPESSKES QDVYVNPVRD EELIPLLENQ GISYKGIPGN NWIAELLQWI LPFGLLIGIY FFVFRRMGGP GSQFMNIGKN KAALYENLDE HTRITFKDVA GLDEAKGEVM EVVDFLKDPK KYTKLGGKLP KGVLLVGPPG TGKTLLAKAV AGEADVPFFS ISGSDFVEMF VGVGAARVRD LFRQAKEKAP CIIFIDEIDA VGRSRGKGAM MGTNDERENT LNQLLVEMDG FATDKGVILM AATNRPDVLD TALLRPGRFD RQIMVDKPDL KGRIDILKVH TKSLSLSTDV NLKVLASQTP GFAGAEIANA ANEAALLASR KGKQSIEMKD FEDAIERVVA GLEKKNKVIN PQEKRIVAYH EAGHAIISWL LAENDAVQKI SIVPRGMSAL GYTLNLPLED RYLMTKTELF SRICGLLGGR IAEDIVFNEI STGAQNDLEK VTEIAYNMVV VYGMSEKLGN ISYYESNNPY YGGPGVDKKY SDHTARLIDE EVHDTISRAE QAVREILTKN RDRLEALAQE LLRKEVVQYC QIEEILGKRP AGNGPEHIDR ECDEHVVQAE ATDTPAEKQS NEDPVSKEER LKLEAAVEEI RKKRESSES
|
| |