Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0121 |
Symbol | |
ID | 6458466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 125650 |
End bp | 126798 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642724108 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_002014828 |
Protein GI | 194332968 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.929913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC TCTCTATCCT CGGCAGCACC GGATCTATCG GCTTAAGCAC CCTTGATGTT GTCCGTCAGC ACCCCGACCG TTTCACCATC ACCGGTCTTG CTGAAGGTCA TGACGTTACC CTTCTTGCAG AACAGATCAG GGAATTCAAG CCATCGATTG TCTCAGTCCG GGATGAAGCA TCTGCGAATC AGTTGCGAGA ACTGATCGGC GAGTCCGGTC CGGAAATCCG CTGGGGTATT GAGGGTGCTG CAGTCGTTGG CGAAGCTGAT GGCTCTGATA TGGTGGTATC GGCAATTGTC GGCGCTGCAG GTCTCGTCCC GACAGTACGA GCGATCAAAG CCGGTAAGGA TATCGCTCTG GCCAACAAGG AAACTCTCGT TGTTGCAGGA CAGCTTGTCT CAGAACTCGT CAGAGAACAC AAGGTGCAGC TACTTCCCGT CGACAGTGAA CATTCTGCGA TATTCCAGTC CCTGTCAGGT CACCGCACAG AAGATATTGA AAGGATCATC CTCACCGCAT CGGGAGGCCC TTTCCGTAAA ACCCCGGCGG AAGAGCTGAA GCTGGTCAAG CCGGAACAGG CCCTGAAACA TCCGCAGTGG TCAATGGGCG CAAAGATCAC CATCGACTCG GCAACCCTTA TGAACAAAGG TCTCGAAGTC ATCGAGGCAC ACTGGCTCTT CAACATGCCA GCTGAAAAGA TCGGCGTAGT TGTCCACCCT CAGAGCATCA TTCACTCGAT GGTTGAATAT ATTGACGGCT GTGTTATGGC TCAGCTCGGC GCTCCCGATA TGCGCGCACC GATCGCCTAT GCGCTCTCCT GGCCGGAACG GTGCGAAAGC GGCATCAAAA AGCTCGACCT GACGCAGATA GGAACCCTGA CCTTCGAAGA GCCTGACATG AAACGCTTCC CCGCCCTCCG GCTCGCGTTC GACGCACTCA GGGAAGGAAG AACCTATCCT GCCGTACTGA ACGCCGCGAA TGAAATTGCC GTTGCTGCAT TTTTAAACAA CAACATCGGC TTTACCGATA TCCCGGCCAT TGTCGACAAA ACCATGCAGG CCCATGAGGC ATTGACGCCT GTCGATCTCG ACGAATATCT GGCAGTTGAC CGCTGGGCCA GAGAAACTGC AGCGGCATTA ACCCTGTAA
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Protein sequence | MKSLSILGST GSIGLSTLDV VRQHPDRFTI TGLAEGHDVT LLAEQIREFK PSIVSVRDEA SANQLRELIG ESGPEIRWGI EGAAVVGEAD GSDMVVSAIV GAAGLVPTVR AIKAGKDIAL ANKETLVVAG QLVSELVREH KVQLLPVDSE HSAIFQSLSG HRTEDIERII LTASGGPFRK TPAEELKLVK PEQALKHPQW SMGAKITIDS ATLMNKGLEV IEAHWLFNMP AEKIGVVVHP QSIIHSMVEY IDGCVMAQLG APDMRAPIAY ALSWPERCES GIKKLDLTQI GTLTFEEPDM KRFPALRLAF DALREGRTYP AVLNAANEIA VAAFLNNNIG FTDIPAIVDK TMQAHEALTP VDLDEYLAVD RWARETAAAL TL
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