| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0112 |
|---|
| Symbol | |
|---|
| ID | 6458526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 114369 |
|---|
| End bp | 115487 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642724099 |
|---|
| Product | hydrolase, peptidase M42 family |
|---|
| Protein accession | YP_002014819 |
|---|
| Protein GI | 194332959 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | [TIGR03106] hydrolase, peptidase M42 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.294228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACTA TCGATACCGA ATACCTCAAA ACAACCCTCC TGAAACTGCT CGACATTCCA
AGCCCGACCG GCTATACCGA TGAAATCGTC CACGCTGTCG GCAGGGAGCT GGAACGCATG
GGGGTCCCGT TCGAACTCAC CCGCCGCGGA GCGATCCGTG CAACGCTCAA GGGGGCGCAG
CCAAAACTTG ACAGGGCTAT CGTCTCGCAC CTCGACACAC TCGGCGCCAT GGTGAGAGAA
CTCAAACCCA ATGGCAGGCT GGGAATCATG ATGATAGGCC ACTGGTCGGC CAGATTTGCT
GAAGGCGCGA GAGTCACCAT CTTTACCGAT AAACGCTCCT TCCGCGGCAC GATCCAGCCT
CTCAAGGCAT CCGGGCACGT CTACAACGAC GAGATAGATA CCCAGCCAGT CTCATGGGAC
AATCTTGAGG TACGGATCGA TGAAAAACTC TCTACCCGGG AAGATCTCGA AGCGCTCGGC
TTCAATGTAG GCGACTTCAT TGCCGTGGAC AGCAGCCCGG AACTCACCTC CAGCGGATTC
ATCAAGGCAC GCCATCTCGA CAACAAAGCC GGTGTTGCCT GCCAGCTCAC GACAATCAAG
GCGATCGTTG ACGCAGGCAT AACACTTCCT GTCACCTGCC ACCCGCTCTT TACCATCTCC
GAAGAAGAAG GGACAGGCGC CTCGTCGATT CTGCACGGCG ATGTCGCCGC CATGGTCGCT
ATAGACAATT CAACGGTCGC ACCGGGGCAG AACTCCAGGG AAGACAGCGT TACCATCGCC
ATGCGCGATC AGGGCGCGAT CTACGATTAC CACCTCACCC ATCGTCTTAT CAGCCTCTGC
GAAGACAACG CCATTCCCTA TGTCCGCGAT GTTTTCCGCC ATTACAGGTC TGACGCTGCT
TCTGCACTCT CTGCCGGAAA CGATATCCGC ACCGGGCTTA TCTGCTTCGG GCTGGATGCT
TCGCACGGCC ATGAAAGAAC CCATATCGAT TCACTCATAG CCATCTCCCG GCTTCTATGC
GCCTACCTGC AAAGCACCCC GAGAATCAAG CACGACAGCA ACAAACTCGG GCCGCTGGAA
GGCTTTCCAA TGCTTTCAGT CAACAAAAAA ACGCGTTAA
|
|---|
| Protein sequence | MITIDTEYLK TTLLKLLDIP SPTGYTDEIV HAVGRELERM GVPFELTRRG AIRATLKGAQ
PKLDRAIVSH LDTLGAMVRE LKPNGRLGIM MIGHWSARFA EGARVTIFTD KRSFRGTIQP
LKASGHVYND EIDTQPVSWD NLEVRIDEKL STREDLEALG FNVGDFIAVD SSPELTSSGF
IKARHLDNKA GVACQLTTIK AIVDAGITLP VTCHPLFTIS EEEGTGASSI LHGDVAAMVA
IDNSTVAPGQ NSREDSVTIA MRDQGAIYDY HLTHRLISLC EDNAIPYVRD VFRHYRSDAA
SALSAGNDIR TGLICFGLDA SHGHERTHID SLIAISRLLC AYLQSTPRIK HDSNKLGPLE
GFPMLSVNKK TR
|
|---|
| |