Gene Paes_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0111 
Symbol 
ID6458527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp112444 
End bp114354 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content55% 
IMG OID642724098 
Productpotassium efflux system protein 
Protein accessionYP_002014818 
Protein GI194332958 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000503548 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG GAGGATTCTT TTTTCAGGCA TTTGTCTATC TCACCGCAGC GGTTGTTTCG 
GTGCCGCTGG CAAAGAAGCT CGGGCTCGGT TCGGTGCTCG GCTACCTGAT TGCAGGTGTC
GTGATCGGGC CGTTTGTTTT CGGCTTTATC GGCGAAGAGG GACAGAACGT TATGGAGTTC
GCAGAGTTCG GGATTATCAT GATGCTCTTC CTTATCGGTC TCGAACTTCA GCCGCAGATG
ATCTGGAAGC TCAAGGGCCC GATTCTCGGC ATGGGCGGCC TGCAGGTGAC GGTGACCGCG
CTGCTGGTGC TTGCAGGGGC ACTGCTGTTC GGTCTTGAAT GGAAGACAGG TCTGGCTCTC
GGTCTTGTGC TGGCCCTTTC GTCTACCGCT ATCGTGCTGC AGACTCTGCA TGAGAAGGGG
CTGATGAAAA CCGACGGTGG GCAGAACTCT TTTTCCGTCC TGCTGTTTCA GGATATCGCT
ATTATTCCCA TTCTTGCTGT GCTGCCGCTT CTGGCTGCCG GGCACAGTGC AGGCGAAACT
TTTCATGCCG GTGACGCTCA TCACGGACCA GTGACCTGGG TCGAGGGTCT GCCGCTCTGG
GGGCAGACGG TGACGGTTCT CGGGGTTGTG AGCGGAATCG TGGTTGCAGG CAAGTACCTG
ATTAATCCTG CCTTCAGATT GATTGCCCGG ACCAGGCTGC GCGAACTTTT TACGGCTGCG
GCCCTGCTGC TGGTGATCGC GATCACCATT CTCATGGGAA AGGTCGGATT GAGCCCTGCG
CTCGGGACCT TTCTCGCCGG AGTGATTCTT GCCCAGAGCG AGTACCGCCA TGAGCTGGAG
ACTAATATCG ATCCGTTCAA GGGGCTGCTG CTCGGGCTTT TTTTCATTGC CGTTGGAGCG
TCGATCGATT TTCATGTCAT TGGGGAGAAC CCGTTGCTTA TTCTGCAGCT GGTCGTTGCG
CTCATGGTGC TCAAGTTTCT CGTGCTGGCT CTCATCGGCA AGGTGTTCAG AATGAGTTAC
GACAACATAC TGCTTTTTGC CTTTGCTCTG GCCCAGGGCG GCGAGTTTGC CTTCGTGCTT
TTTTCGTTCG GTTTGAACAA CAACGTGTTT GAGCCGTCGC TCGTCAATCC GATGATTGCC
GTGGTCGCTA TCACGATGGC ATTGACTCCT TTGCTTCTTC TGTTGAACGA GAAGCTGATT
CAGCCCAGGT TCGGCACAAA GGAAAAGGCG GCTCCTGAAG AACGCTCTTC TTCGTCGATC
GATGAGAGCA GCAGAGTCAT CATTGCCGGT TTCGGGCGTG TCGGCAGTAC CGTGGGGCGA
TTTATGCAGG CCAATGATGA GAATGCCACC TATCTCGATA TGGATCCCGA CAATGTTGAT
CTCCTTCGGA AACTGGGGCT GAACGTCTTT TACGGCGATG CGTCGCGTTA CGATCTTCTG
CATGCGGCAG GGGCAGCTGA AGCGCAGCTG CTGATCATTG CGGTCGATGA CCCTGAAAAA
ACCGTTGCCA TTGCCCGAAC GGCAATGAAA CATTTTCCCC ACCTGGAAAT TATTGCGCGG
ACGAACGGGC TTGTTGATTC GCATGAGCTG ATCGATCTGG GGGTCAAACG GGTCTATCCC
GAGACGCTCG ATTCCTCGTT ACGCATCGGT GTCGATGCGC TCAGTCTTCT GGGGCACCGT
CGTTATCAGG CCATACGCTC CATGCATACC TTCCGTCATC ACGAGGAGCG TCATTTTCAT
GAACTTGCCG CTCTTCGTCA TGACCGCAAG GAGCTGATAC GTGAAACGAA AAAGCGCATC
GAAGATCTGG AGGAGTTGAT GCTGACGGAG AAACGCGAAG AGCACAAGGA CAAGGAGCTC
GGCTGGGATG CAGCCGGACA TATGTCTGAT AAAGGTCATA TGCCCGGTTG A
 
Protein sequence
MHDGGFFFQA FVYLTAAVVS VPLAKKLGLG SVLGYLIAGV VIGPFVFGFI GEEGQNVMEF 
AEFGIIMMLF LIGLELQPQM IWKLKGPILG MGGLQVTVTA LLVLAGALLF GLEWKTGLAL
GLVLALSSTA IVLQTLHEKG LMKTDGGQNS FSVLLFQDIA IIPILAVLPL LAAGHSAGET
FHAGDAHHGP VTWVEGLPLW GQTVTVLGVV SGIVVAGKYL INPAFRLIAR TRLRELFTAA
ALLLVIAITI LMGKVGLSPA LGTFLAGVIL AQSEYRHELE TNIDPFKGLL LGLFFIAVGA
SIDFHVIGEN PLLILQLVVA LMVLKFLVLA LIGKVFRMSY DNILLFAFAL AQGGEFAFVL
FSFGLNNNVF EPSLVNPMIA VVAITMALTP LLLLLNEKLI QPRFGTKEKA APEERSSSSI
DESSRVIIAG FGRVGSTVGR FMQANDENAT YLDMDPDNVD LLRKLGLNVF YGDASRYDLL
HAAGAAEAQL LIIAVDDPEK TVAIARTAMK HFPHLEIIAR TNGLVDSHEL IDLGVKRVYP
ETLDSSLRIG VDALSLLGHR RYQAIRSMHT FRHHEERHFH ELAALRHDRK ELIRETKKRI
EDLEELMLTE KREEHKDKEL GWDAAGHMSD KGHMPG