| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0108 |
|---|
| Symbol | trkA |
|---|
| ID | 6458535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 109389 |
|---|
| End bp | 110777 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642724095 |
|---|
| Product | potassium transporter peripheral membrane component |
|---|
| Protein accession | YP_002014815 |
|---|
| Protein GI | 194332955 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.386766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA GGAATATTCT CATTATCGGC CTGGGCGGGG TCGGCCTTCA CCTTGCAAGG
CGTCTGGTAC AGGAAGGTTA CGGTGTCACC GTCATTGAAT CGATTCAGCA CCTCATCAGC
GCTGCAAACG ACAACCTTGA CGCCAAGATT ATCGACGGCA ACGCCATGGA GCTGTCGAGC
TGGAAACGGG CCCAGGCTGA AAGCATGGAT CTGATGATCG CCGTCACGGA CCAGGATTCC
GTCAATATGA TCGCATCCAT CATTGCCGAT CGCTTTGGCA TCCCACGAAA AATAGCCCGC
GTCCGCTCAC CGGAATACGG CTATGACAAT TCATTGCTCA ACAAAAACGA CTTCAAAATC
GATCTGGTTA TCCACCCCGA AGAGCTGATC GCTCGCGAGA TAGCCCGTCT CGTGATGCGC
TCGTCGGGAA ACGATGTCAT CGATATCGGC GAAGGGACCA TGAAAGTTTG CGCCCTTCGC
GTCAATGCCG CATGCCCTAT AGCAAACAGA ACTATCGGTG AAATCAGATT GCTGCACAAT
GAATTCCCTT TCAGGGTCGT AGCGATTGCC CGCGGCATCA ACACCATCAT TCCCGGAGAC
GACGACACTA TCATGCCGAA TGATCAGGTC TTCATTATGG TCAATGGGGC TTATCTGTCC
CGCCTTATGC AGCTCCTGGG AATGAAGGAA CAGACCATCC AGAGGGTCAT GATCGTCGGT
GGCGGCATGG TCGGCGCGCG TGTTGCCGAG CTGCTGTGCA AAACCGTCCG GATCAACCTG
ATTGAATCCG ACCAGCAGCA TGCCGAAGAA CTCGCACTTT CGCTGAAAAA TACTGATGTT
CTGCATGGTG ACGGCACCGA TGTCAACGTT ATGGTCCTCG GCGGCCTGAT GGAAATGGAT
ATTTTCATTG CAACAACGGG CAACAACGAA ACCAATATCA TCAGCTGCCT CCTTGCCAAA
CATATGATGA ACAGGACCAA CGTCGATCCC GCAGGCAAGG AAGGAAAAAC CATCGCGCTG
GTCAAGAAAG AGGACTATCT GGTGCTGGCC TCGACCATCG GACTCGATAT CGCCCTGAAC
ATGAAAATTT CTGCGGCCAA CGAAATCATG AAATTTATCC GCATAGGTGA ACTGCTTTCT
GTAGCTCATC TGCACGGAGT CGACGCCGAA GTCATTGAGC TGGTCGCTGC CGATCGCTCA
CCGATCACGA AAAAACGCCT TGGCAAACTC CGTTCGACGC TTCAGGACAA AGGCATCCTT
GTTGCGGGCA TCATCACCAA CGGCACCTGC ATCCTGACCG ACGACGACAC CCTTATCGAG
CCCAATGAAC GCGCAATTGT CGTTTCAGCA ACCAGAAGCC TGAAAGACGC GCAGCAACTC
TTTCAGTAA
|
|---|
| Protein sequence | MSVRNILIIG LGGVGLHLAR RLVQEGYGVT VIESIQHLIS AANDNLDAKI IDGNAMELSS
WKRAQAESMD LMIAVTDQDS VNMIASIIAD RFGIPRKIAR VRSPEYGYDN SLLNKNDFKI
DLVIHPEELI AREIARLVMR SSGNDVIDIG EGTMKVCALR VNAACPIANR TIGEIRLLHN
EFPFRVVAIA RGINTIIPGD DDTIMPNDQV FIMVNGAYLS RLMQLLGMKE QTIQRVMIVG
GGMVGARVAE LLCKTVRINL IESDQQHAEE LALSLKNTDV LHGDGTDVNV MVLGGLMEMD
IFIATTGNNE TNIISCLLAK HMMNRTNVDP AGKEGKTIAL VKKEDYLVLA STIGLDIALN
MKISAANEIM KFIRIGELLS VAHLHGVDAE VIELVAADRS PITKKRLGKL RSTLQDKGIL
VAGIITNGTC ILTDDDTLIE PNERAIVVSA TRSLKDAQQL FQ
|
|---|
| |