| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0102 |
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| Symbol | |
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| ID | 6458572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 99809 |
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| End bp | 102649 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642724089 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002014809 |
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| Protein GI | 194332949 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.436886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGT TTCACGGAAA CAACAAAACA GATAACCTTT CAGCGCAGCA AATCCTGTAC
CTGTACCAGA GGTTTTTTAA CCGAAACAAG CCCATCATGA AATACTCATT TCTGCTGTTA
ATCACATGCG TTTCGACGCT TATGATCAAC AGCCTGTCGA TTTTACTTCC CTCAGGAGCT
GCCGGGGCGG CAACGATCAC CGGCATCGTG GTCGACGACG CCGACGGACT GCCGCTCCCT
GCAGCAACCA TCTCTGTCAA AGGCTCTGAA GAAGGCGCCA TAACCGGTCA GAACGGTCGC
TTCCGGCTGG AAAATGTCGC CACCAGTAAC CCCGTTATTG TGGCATCCTA TCTTGGCTAC
ATGACCGAGG AATACCCTGT ACTGCTCTCC TCTGAAGGTC TGGCAAAACT CTCCATCCGG
CTCAAACCAG GCATTGTGGT CAGCCAGGAG ATCACCATCG TAGGCGAAAT GCTCAAAGGC
CAGGCCAAAG CCCTCAACCA GCAGAAAAAC AATCTCAATG TCACCAATGT GGTCGCAGCG
GACCAGATCG GCAAGTTTCC TGACTCGAAC GTAGGCGACG CACTCAAACG CATTCCGGGC
ATCAGCGTCT TCACCGATCA GGGAGAAGCT CGCTTCGGCC ATATCCGCGG CACCGAACCC
CGTTTCAACT CCGTCACCGT CAACGGAGAG CGCATTCCAT CAGCCGAAGC TGAAAACCGC
ACCATTCAGC TCGATCTCAT CCCGGCAGAC ATGGTCCAGA CTATCGAAGT GACCAAAGCC
CTCACACCCG ACATGGATGC GGATGCAATC GGCGGCTCGA TCAATCTTGT CACCAAACTC
CCCACCGAAG AGCGATTTTC TCTCACCGCG GGCGGAGGCT GGAACATGAT CGACGAAACA
GGCGGAGCCC GCTACCAGCT CGGCGGAACC TATGGCAACC GCTTCCTTGA CGGCAAACTC
GGCGTGCTCT TCAGCGTCTC ATACGACGAT AACGATTTCG GATCAGACGA CATCGAAGCC
GAATGGGATG CCGAAGAGGA CGGGATTGAG GCTCTGAAAG AGTTTCAGGT CAGACAATAC
GATGTCCGCC GCATCCGGAA AAGTTTCTCG ACCGGGCTCG ACTACCGGTT CAACGAAAAC
CACGTCCTGA AATTCAACGG GATCTACAAC TGGCGCAAGG ACTACGAAAA CCGCTACCGG
GGAAGCTACA AAGACCTCGA CGAGGACCTG GCAGAGCTGG TATGGGAAAC CAAAGGAGGA
ACGAACAACA ATGCCCGCCT CGAAGACCAG CGCATGATGT CGTTCACGCT CGGCGGTGAA
CACGATTTCG GTAAACTCGA CCTCGACTGG CAGGCAGCCT ATTCCAAAGC CTCCGAGGAG
CGCCCGAACG AACGTTATGT CTCCTTCGTT GCCGAAGACC AGCCATTCAT CACTGACATC
AGCAACCCGG AACACCCCTT GGTCACGGTG AACAGTAACG TCGCCGACGG AATTTCCGGC
AACGGATCAT GGACCCTCGA TGAACTCACC GAAGAGTATC AATACACCGA GGATATCGAT
AAAAACTTCG CACTGAACCT TGCCTACGAC CTGTCAGACT CTTTCAAACT GAAGTTTGGC
GGAAAAATTC GCGACAAGCA TAAAATGCGT GAAAACGATT TCTACGCCTA TGAACCTGCA
GCCGAAGAAG CGTTTTACAC TGCTGTCTAT GACAACCTTT CGGACAAAAC CAAAGAGGGC
TTTCTCCCCG GCGAGCAATA TGAATCCGGC AGTTTCGTGT CCAATGATTT TCTCGGAAGT
CTCGACCTGA ATTCCCAGGA CTTCGACAAA GAACGCGTAC TCGAAGAGCT GGCAGGCAAC
TTTGACGCGA AAGAACAGAT CAAAGCGGTC TACCTCATGG GAAGCTGGGA TCTGAGCCGG
AAAGCAACCA TTCTCGGCGG CGTAAGGCTC GAACACACCC GCAACGAGTA TGACGCTTAT
GAGTACAATG CCGACGAAGA TATCCTGACA AAGGTAACCG GCACCCCGTC AGACTATACC
AATGTCCTTC CCTCTATGCA TCTTCGCTAC AAGATCAACG ATATGACCAG CCTCAAGCTT
GCCTATACGC ATACGCTCTC AAGGCCGAAC TACTTCGATC TTGCACCGTA TACCCTCATC
GACGATGAAG AAAAATACAT TGGCAACCCC GATCTCGAAC CGACGATGTC GAAAAACGTC
GATCTCATGA TCGAGCACTA CCTGAGCGAT GTCGGCATCC TGTCGGCAGG CGTTTTCTAC
AAATCGGTCA GTGATTTCAT CATCACAAGA AAAACAGACG ACCCCGAGTA TGAAGACGGT
CTCTTTCAAC CACTGAACGC TGGTGACGGA ACCCTTACGG GCCTCGAAAC AGCAGCGCAG
TTTCAGTTGC CCTTCATCCC CGGGCTCGGC CTCTTCCTGA ACTACACCTA TACGCACTCA
ACGATCGACA ACTTCAACAT CGAAGGGCGC CAGAGCGATG GGCTCCCTCT TCCCGGCAGC
CCCGAGCACA CCGCAAACGC CTCCGTCGCC TATGAAAAAG GGCCGTTCAA CATCCGCCTC
TCGGCGAACT ACCACAGTGA CTTCATCGAT TCCGAGGAAG GATCGATCGG GGAAAACAAG
TGGGAAGACC GCTACTGTGA CGACGCATTC CATCTCGACC TCAACGGGGG CTACCGCCTG
AACGATATTG TCCGCCTCTA CTTCGAGGTC AGCAACCTGA CCAACGAACC GTTGCGATTC
TATCAGGGCG GGGAAAGCTA TATCGCTCAG GAAGAGTGGT ATGAACGAAG GATTCTTCTT
GGCCTCAAAG CAAACTGGTA A
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| Protein sequence | MTLFHGNNKT DNLSAQQILY LYQRFFNRNK PIMKYSFLLL ITCVSTLMIN SLSILLPSGA
AGAATITGIV VDDADGLPLP AATISVKGSE EGAITGQNGR FRLENVATSN PVIVASYLGY
MTEEYPVLLS SEGLAKLSIR LKPGIVVSQE ITIVGEMLKG QAKALNQQKN NLNVTNVVAA
DQIGKFPDSN VGDALKRIPG ISVFTDQGEA RFGHIRGTEP RFNSVTVNGE RIPSAEAENR
TIQLDLIPAD MVQTIEVTKA LTPDMDADAI GGSINLVTKL PTEERFSLTA GGGWNMIDET
GGARYQLGGT YGNRFLDGKL GVLFSVSYDD NDFGSDDIEA EWDAEEDGIE ALKEFQVRQY
DVRRIRKSFS TGLDYRFNEN HVLKFNGIYN WRKDYENRYR GSYKDLDEDL AELVWETKGG
TNNNARLEDQ RMMSFTLGGE HDFGKLDLDW QAAYSKASEE RPNERYVSFV AEDQPFITDI
SNPEHPLVTV NSNVADGISG NGSWTLDELT EEYQYTEDID KNFALNLAYD LSDSFKLKFG
GKIRDKHKMR ENDFYAYEPA AEEAFYTAVY DNLSDKTKEG FLPGEQYESG SFVSNDFLGS
LDLNSQDFDK ERVLEELAGN FDAKEQIKAV YLMGSWDLSR KATILGGVRL EHTRNEYDAY
EYNADEDILT KVTGTPSDYT NVLPSMHLRY KINDMTSLKL AYTHTLSRPN YFDLAPYTLI
DDEEKYIGNP DLEPTMSKNV DLMIEHYLSD VGILSAGVFY KSVSDFIITR KTDDPEYEDG
LFQPLNAGDG TLTGLETAAQ FQLPFIPGLG LFLNYTYTHS TIDNFNIEGR QSDGLPLPGS
PEHTANASVA YEKGPFNIRL SANYHSDFID SEEGSIGENK WEDRYCDDAF HLDLNGGYRL
NDIVRLYFEV SNLTNEPLRF YQGGESYIAQ EEWYERRILL GLKANW
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