Gene Paes_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0090 
Symbol 
ID6458658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp89027 
End bp89731 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID642724077 
ProductDNA alkylation repair enzyme 
Protein accessionYP_002014797 
Protein GI194332937 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACT TGGACATCCA GCATAGGCTG CGTGAAAATG CTGACCCTGA AAAGGCAGAA 
CACGCACAGC GCTTTTTCAA AACAGGTAAA GGAGAGTACG GTGAGGGAGA CCGGTTCCTC
GGGATCCGCG TGCCGGTACT CAGACGTTAT GTCAGGGAGT TTCAGCATCT GGCGCTGGAA
GAAACAGCGG AGATTCTCCA GTCCCCTTAC CATGAAGAAC GCCTCTTCGC CCTGCTGCTC
CTGGTGAGGA AATACCAGAA AGGAGACAGA GCGCAACAAG AAGCTGTTTT CAGGCTCTAT
CTCAAAAATC TCCAACAGAT CAACAACTGG GACCTGGTCG ACAGCTCGGC CCCCTCCATT
GTCGGCGCAT GGCTTGAAGA GCGCGACAAA ACACTGCTTT ACCAGCTTGC AGAATCACCG
AACCTCTGGG AACGACGAAT CGCTATCATC TCCACCTTTC ATCTGATCCG CAACAACAAG
TTCGATGACG CCCTGGCCAT CGCCCGGCTG CTCATCGCCG ACAGACAAGA CCTCATTCAC
AAAGCCGTCG GCTGGATGCT GCGCGAAATC GGCAAACGCA ACATCGCAAT TGAAAAAGCA
TTTCTCGACC GACACGCCTT GACCATGCCC CGCACCATGC TCCGCTACGC CATCGAACGG
TTCGAGGAAG ATGAACGGAA AAGATATCTT GAGCGGAAAC AATAA
 
Protein sequence
MTHLDIQHRL RENADPEKAE HAQRFFKTGK GEYGEGDRFL GIRVPVLRRY VREFQHLALE 
ETAEILQSPY HEERLFALLL LVRKYQKGDR AQQEAVFRLY LKNLQQINNW DLVDSSAPSI
VGAWLEERDK TLLYQLAESP NLWERRIAII STFHLIRNNK FDDALAIARL LIADRQDLIH
KAVGWMLREI GKRNIAIEKA FLDRHALTMP RTMLRYAIER FEEDERKRYL ERKQ