Gene Paes_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0056 
Symbol 
ID6459106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp61525 
End bp64380 
Gene Length2856 bp 
Protein Length951 aa 
Translation table11 
GC content56% 
IMG OID642724049 
Productmolydopterin dinucleotide-binding region 
Protein accessionYP_002014769 
Protein GI194332909 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA ACCATAAACC GACGATTATT GAGAAAGCTG CAGAGGCCCT GCACGTTATT 
CCTGACTTGC ACGCCAACAG CACAGGCCCT GCTGCCGAAC CCTGTCAGGG TGAAGATTGC
TCCTGTCCCC CGCCGGAATC CTGGGACAGC TGGGTAGAGT ATGACTCCAC AAGCTGGCCC
GAGCGCAAGT CGCGCGAATA TATGCTGGTG CCGACATCCT GCTTCAATTG TGAGGCAGGA
TGCGGTCTGC TCGCCTATAT CGAGAAGGAA ACCATGCAGA TCAGGAAGTT TACCGGTAAC
CCCTATCATC CTGCAAGCCG CGGGCGTAAC TGCGCCAAAG GACCGGCTAC GATCAATCAG
GTTGAGGATT CCGACCGTAT TCTCTATCCG CTCAAGCGCG TCGGCCCGAG GGGCAGCGGC
AAGTGGGCGC GGGTGAGCTG GGAGAGCGTA CTTGAGGATA TCTCATCGAG AATGCGCAAG
GCGCTGCAGG AGAAACGCAA TAACGAGATC TCCTATCACG TCGGTCGCCC CGGTCATGAA
GGTTTTATGG ACTGGGTGCT CAAAGCCTGG GGCGTGGATG GTCATAACAG TCATACCAAT
ATCTGTTCTT CCGGGGCCCG TTTCGGCTAC GCGATCTGGC AGCTCTACGA CCGTCCTTCG
CCTGACCATT CAAATGCGAA ATTTATTCTT CTGGTGAGCG CTCATCTCGA AGCCGGTCAC
TATTTCAATC CCCATGCCCA GAGAATTGTC GAAGGCCGTA TGAAAGGGGC GAAACTCGCC
GTGCTGGATC CGAGGCTTTC CAATACCGCC AGCATGTCGG ACTACTGGAT GCCGAGCTAT
CCGGGCAGCG AGCCTGCGGT TTTGCTTGCT ATGGCCAAAG TGATCCTCGA CGAGGGGCTC
TACAATCGCG ACTATCTTGA AAACTGGGTG AACTGGCAGC AGTATCTTGA ATCGGAATAT
CCCGACCGCC CGACCACGTT CGAAGCATTT ATCGAAGCGC TTAGCGCCGA GTATAACGAC
TACACTCCCG AATATGCTGA AAAAGAGAGC GGCGTGCCTG CAGCAACGAT TCGTGATGTC
GCCCGTCAGA TCGGTGAAGC GGGAGAGCGT TTTTCAACCC ACGTTTGGCG GAGTGCAAGT
AGCGGAAACC TTGGAGGATG GGAGGTGTCG CGTACCCTGC ACTTCCTCAA CGTACTGACT
GGCAGTGTCG GCACCCCAGG TGGAACTGCT CCCAGCGCAT GGAACAAGTT CAAACCTACC
GTTCATACCC ATCCTGAGCC CCAGAAGTTC TGGAACCCGC TGCATCTGCC CGACGAGTAT
CCGCTCGCAC ACTACGAGAT GAGCTTCCTT CTGCCCCATA TGCTCAAAGA GGGACGGGGC
AAACTCGATG TCTATTTCAC GAGGGTGTTC AATCCGGTCT GGACCTATCC GGACGGCTTC
TCCTGGATAG AAGCACTCGA GGATGAGTCG AAGATCGGCC TGCATGTTGC CCTCACGCCG
ACCTGGAACG AAACAGCCTA CTTTGCCGAT TACGTCCTGC CCATGGGCCA CTCGCCCGAG
CGCCATGACC TGGTGAGTTA CGAGACTCAT GCAGGAAAGT GGATCGCGTT TCGGCAACCT
GTGCTGCGCG TGGCGCACGA GCGTCGTGGC ACGCCGAAGG AATTTACCTG GCAGGCCAAC
GTCGGGGAGG TGTGGGAAGA GGACGAGTTC TGGATCGAGC TCTCCTGGCG CATTGATCCT
GACGGTTCGC TTGGTGTGAA GAAGCATTTC GAATCGCCAT ACCGTTCCGG TGAGAAAATC
ACCATCAACG AGTATTATCA GTATATCTTC GAGCATACCC CGAACCTGGC GGAAACCGCC
GAAGCGGAGG GGCTGACGCC GCTCGCCTAC ATGAAAAAGT ATGGCGCTTT CGAGATCGAA
ACCGATGTCT ACAATGTGCA TGAGACTCCG GTTGATATCG CAGGAGCAAA CCTTGATGGG
TCCTCCAGAA CCATCTACCG CGACGGTAAA CCTGTCGGTA TCCAGGTGCG CGGAGAGAAC
TGTGTCGGTT TTCCGACTCC TTCGAGGAAG CAGGAGCTCT ATTCGCAGAC AATGATCGAC
TGGAAGTGGC CCGAGCACAG GCTTCCCTCC TATATCAAAA GCCATGTGCA TCCGGAAACG
ATCGACCGCT CGAACAATGA GTTTGCTCTG ATTCCGACCT TCCGTCTGCC GGTCCTGATC
CATTCCCGTT CCGGTAACGC CAAGTGGCTT GCAGAGATTG CGCATCGCAA TCCGCTTTGG
ATCAATGCAG ACGACGCTGC CGCCATGGGG ATTGAAAATG CTGATCTGGT CAGGGTGAAC
ACCGATATCG GGTATCATGT GAACCGGGCC TGGGTCACCG AATCCATCCG TCCCGGCGTG
GTAGCCTGCT CTCATCATAT CGGCAGGTGG CGCCGCGATC AGGACGCTAA AGGCAACCGC
TGGGCAACCA ACCTCGTCTC GATCAACCGG GAGGAGAAGG GCAAGTGGCG CATGCGGGTC
AAAGAGAGTG TCGAGCCGTT TGAGAGTCCC GATCCCGATT CCGGACGTAT ATTCTGGTCG
GACGGCGGCG TGCATCAGAA CATCACCTTT CCGGTACACC CGGATCCCAT CAGCGGGATG
CACTGCTGGC ATCAGAAGGT CCGCATCGAA AAAGCGCATG CTGACGATCA GTACGGCGAT
GTCTTTGTCG ATACTGACCG TTCGTTCGAG ATTTACAAAG AGTGGCTTGC CATGACCCGT
CCGGCTCCCG GTCCGGGAGG GCTTCGCCGG CCGATGTGGC TCAACCGCCC GTTGCGTCCT
GCCGACGAGA CCTATTATAT TGGAAAAGGT TCGTAG
 
Protein sequence
MTFNHKPTII EKAAEALHVI PDLHANSTGP AAEPCQGEDC SCPPPESWDS WVEYDSTSWP 
ERKSREYMLV PTSCFNCEAG CGLLAYIEKE TMQIRKFTGN PYHPASRGRN CAKGPATINQ
VEDSDRILYP LKRVGPRGSG KWARVSWESV LEDISSRMRK ALQEKRNNEI SYHVGRPGHE
GFMDWVLKAW GVDGHNSHTN ICSSGARFGY AIWQLYDRPS PDHSNAKFIL LVSAHLEAGH
YFNPHAQRIV EGRMKGAKLA VLDPRLSNTA SMSDYWMPSY PGSEPAVLLA MAKVILDEGL
YNRDYLENWV NWQQYLESEY PDRPTTFEAF IEALSAEYND YTPEYAEKES GVPAATIRDV
ARQIGEAGER FSTHVWRSAS SGNLGGWEVS RTLHFLNVLT GSVGTPGGTA PSAWNKFKPT
VHTHPEPQKF WNPLHLPDEY PLAHYEMSFL LPHMLKEGRG KLDVYFTRVF NPVWTYPDGF
SWIEALEDES KIGLHVALTP TWNETAYFAD YVLPMGHSPE RHDLVSYETH AGKWIAFRQP
VLRVAHERRG TPKEFTWQAN VGEVWEEDEF WIELSWRIDP DGSLGVKKHF ESPYRSGEKI
TINEYYQYIF EHTPNLAETA EAEGLTPLAY MKKYGAFEIE TDVYNVHETP VDIAGANLDG
SSRTIYRDGK PVGIQVRGEN CVGFPTPSRK QELYSQTMID WKWPEHRLPS YIKSHVHPET
IDRSNNEFAL IPTFRLPVLI HSRSGNAKWL AEIAHRNPLW INADDAAAMG IENADLVRVN
TDIGYHVNRA WVTESIRPGV VACSHHIGRW RRDQDAKGNR WATNLVSINR EEKGKWRMRV
KESVEPFESP DPDSGRIFWS DGGVHQNITF PVHPDPISGM HCWHQKVRIE KAHADDQYGD
VFVDTDRSFE IYKEWLAMTR PAPGPGGLRR PMWLNRPLRP ADETYYIGKG S