Gene Paes_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0043 
Symbol 
ID6460517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp43731 
End bp45119 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content53% 
IMG OID642724035 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_002014756 
Protein GI194332896 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATA CATCAGATCA GCATGGCAAC GAACCTCTTG ATAGAGCAAA AGGTTATGTT 
TACATCGTCG GTGCGGGTCC CGGCGATCCG GAACTGATTA CCGTCAAGGC TCAAAGAGTG
CTCTCTGAAG CCGATGTCAT CCTCTACGAC GATCTTGTCA GCCTTGAACT GGTCGATCAG
TTCAACGCGT TGAAGATCTA TACCGGCAAA CGCAAGGACA GTCACCATTT CGAGCAGGAG
GAGATCAATC GTGAGATTGT CCGTCATGCC AGTGAAGGCA AAACAGTCGT TCGTCTTAAA
GGGGGAGACC CGTTTATTTT TGGCCGGGGT GGAGAGGAAA TCGATACATT GCGCAACGTC
GGGATTCATT ACGAGATCAT TCCGGGCATT ACGGCTGCCC ACGGTGCGAG CGCCTATACC
GAGATACCGC TCACCATGCG CAGGATATCC TCTTCCGTCG CTTTCTGTAC AGGCCATCCG
GTCAACAGGA TTCAGGTGCC CGATACCGAT ACGATCGTCT ACTACATGGT TGCCTCCACG
GTCCATGACG TGCTTGATGC GGTTGCAGCC AAAGGGCGCT CCGGGGCGAC TATGGTCGCT
GTTGTGCAGA GCGCTACGCA GTACAATCAG AAAACCTACA CCGGAACGCT CGACGAGTTC
AGGAGGCGTG AAAAGGCTGT CTACTCGCCT GCTCTGCTTA TTATAGGCGA CAGCATCGGT
CAGTTTATAG AGCACAACTG GCATTCGCGC AAGAAAAAGG TGCTGATGAC CGGCGGGGAT
TCAAGCCGTT ACAGCAGCAC AGATTATATT ATGGTCCACT TTCCCTGTCG CAAGATTTCA
GGGGCGGATC TCGATGCGGT CAATCGAGTG CTCGATCATA TCGCAGACTA TTCGCTCCTT
TTTTTCCCTA ACAAGTTTTC GGTCAAGTAC TTTTTTCGCT TCCTTTTCGA GTCAGGCAGG
GATGTGCGAA GTCTGGCCCA TATGACCATC TGTACCGCCG GCAGTGCTGC CGCAGCTGAA
CTTCAGGAGT CGGGCCTTGT TGCGGATCAT TACCTTGAAC CGGACGGGAC GGTCGGTTAC
GCGGAGCGTC TTCGTGAGTT GTGCGTTAGC GGTCAGCAGA TCCTGCTTCC GGGATCCAGC
ATTACGGACG ATTCGCTCGT CGCCGGTCTC ACGCAAATGG GCAACAGCGT TACACCGCTT
GGCGTATACG CCCATGAGGT GCGCCAGGAT GAGGTGATCG ATCTCGACTT CATCGATGAA
ATCTATTTCT CGTCACCTGT CTGTGTCAGA AACTTCCAGA CGCTGTTCAA GACGATTCCC
GGTCGCATCA CCGTCACGAC TGCTGACCGC AGTACACAGA ACGAGTACGA CTCGCTCTTC
GGTGACTGA
 
Protein sequence
MNHTSDQHGN EPLDRAKGYV YIVGAGPGDP ELITVKAQRV LSEADVILYD DLVSLELVDQ 
FNALKIYTGK RKDSHHFEQE EINREIVRHA SEGKTVVRLK GGDPFIFGRG GEEIDTLRNV
GIHYEIIPGI TAAHGASAYT EIPLTMRRIS SSVAFCTGHP VNRIQVPDTD TIVYYMVAST
VHDVLDAVAA KGRSGATMVA VVQSATQYNQ KTYTGTLDEF RRREKAVYSP ALLIIGDSIG
QFIEHNWHSR KKKVLMTGGD SSRYSSTDYI MVHFPCRKIS GADLDAVNRV LDHIADYSLL
FFPNKFSVKY FFRFLFESGR DVRSLAHMTI CTAGSAAAAE LQESGLVADH YLEPDGTVGY
AERLRELCVS GQQILLPGSS ITDDSLVAGL TQMGNSVTPL GVYAHEVRQD EVIDLDFIDE
IYFSSPVCVR NFQTLFKTIP GRITVTTADR STQNEYDSLF GD