Gene Paes_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0042 
Symbol 
ID6460519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp43180 
End bp43629 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID642724034 
Productporphyrin biosynthesis protein, putative 
Protein accessionYP_002014755 
Protein GI194332895 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTT TTCTTCCGAT CAATATCCGC ATTGATCATA AAAAACTGCT GTTTATCGGT 
GGAGGCAGCC AGGCTATCCA CAAAATTACG ACACTTGAGC AGTACACTCG CAATATTACC
ATTCTCGCAC CCGAGATTCA TCAGGATCTC AAGGGGAAAG GGTTTACCGA AGTTTATAAG
GAGTACGAGA AGTCCGATCT GGCAGGCTAT TTTCTGGTCT ATGCGAGTAC CGGAAATATC
GGGATTGACC GGAGGGTCCG CGACGATGCC GAATCACTCG GGATTCTGGT CAACGTGGTT
GACAACCGCG AGCTTTCAGG CTTTATCTCT CCTGCTGTCC TGAAGAACGA CGAGATGAGC
ATTGCGATCT CTTCGAACGG CCAGAATGCG AAAAAATCGG TTGCATGGCG CAACCGGCTC
AGGGAGATGG TGGAAAACGG TGATTTTTAG
 
Protein sequence
MKVFLPINIR IDHKKLLFIG GGSQAIHKIT TLEQYTRNIT ILAPEIHQDL KGKGFTEVYK 
EYEKSDLAGY FLVYASTGNI GIDRRVRDDA ESLGILVNVV DNRELSGFIS PAVLKNDEMS
IAISSNGQNA KKSVAWRNRL REMVENGDF