Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0023 |
Symbol | |
ID | 6460060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 25852 |
End bp | 26991 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642724015 |
Product | geranylgeranyl reductase |
Protein accession | YP_002014736 |
Protein GI | 194332876 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02023] geranylgeranyl reductase [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0136897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00371909 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTTACG ATGTCGCTGT CATAGGAGGA GGGCCATCAG GAGCTGTCGC TGCAGCCATA CTGGCAAAAG CGGGCCTGTC AACCGTCCTT ATAGAGAGAA ACCTTGCCAA TGTCAAGCCA TGCGGCGGAG CGATTCCCCT CGGCCTGATT GAAGAGTTCA ACATTCCCGA TCCACTCGTA GAGAAAAAAC TTTCAAAAAT GAGTGTGCGC TCCCCCAGGG GACGAAAAAT TTCTATGGAG ATGCCCAACG GTTACGTCGG TATGGTACGC CGGGAACGTT TCGACAGCTA TTTGCGGGAC CGGGCAGTTC GCCTCGGCGC CGATATCGTC GAGGCTCTTG TCAGGGAGAT CAAACCGGCC TCAAACGGCC ATAGCATCCA CCTCTCGAAA GGCCATGCCC CTATCGAAGC CGACTTCATC ATCGGCGCGG ATGGAGCAAA TTCCAAAACA GCAGAAGAGC TGGATTTTCC CGCTAACGAA CTGCAGGTGA TTGCCATGCA GCAGCGTTTC CACTATAGCG ATACGCTCAA GCCCTATGAA GATCTGGTTG AAATCTGGTT TGATGGTGAA GTATCGCCGG ATTTTTACGG CTGGATTTTT CCGAAAACAG ATCACATCGC TATCGGCACA GGCACTGAAT TCAGGAAACA TGACCTGAAA TCGCTGCAGA AACGATTTAT TGAAAAAATC GGCATCACCG ACAAGCCATA TCTCGACGAG GCAGCAAAAA TTCCCATGAA GCCGAGGAAA TCCTTTACCC AGGACCGTGC AATCCTGGTT GGTGACGCAG CCGGCCTGGT AACACCAGCC AACGGCGAGG GCATCTTCTT CGCCATGAGA TCGGGCAAAC TGGGGGCCGA AGCTATGATT GAGCGCATCA GGAACAACAA GCCATTGCGC TCCTATGAAA AAAAGTTCCG AAAACTCTAC TCGCAGATCT TCTTCGGTCT CCAGGTGCTT CAGTCGGTCT ACTATAAAAA CGATCGTCTG AGGGAAAGTT TTGTCGCTAT CTGCCAGGAT GATGACGTCC AGCAGATCAC CTTCGATTCC TACCTCTATA AAAAGATGGT GCCTGCGCCC TGGAGTGTTC AGATGAAAAT TTTCGGCAAA AACATCTATC ACCTGACAAA GGGTTCCTGA
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Protein sequence | MRYDVAVIGG GPSGAVAAAI LAKAGLSTVL IERNLANVKP CGGAIPLGLI EEFNIPDPLV EKKLSKMSVR SPRGRKISME MPNGYVGMVR RERFDSYLRD RAVRLGADIV EALVREIKPA SNGHSIHLSK GHAPIEADFI IGADGANSKT AEELDFPANE LQVIAMQQRF HYSDTLKPYE DLVEIWFDGE VSPDFYGWIF PKTDHIAIGT GTEFRKHDLK SLQKRFIEKI GITDKPYLDE AAKIPMKPRK SFTQDRAILV GDAAGLVTPA NGEGIFFAMR SGKLGAEAMI ERIRNNKPLR SYEKKFRKLY SQIFFGLQVL QSVYYKNDRL RESFVAICQD DDVQQITFDS YLYKKMVPAP WSVQMKIFGK NIYHLTKGS
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