| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0013 |
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| Symbol | secF |
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| ID | 6460788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 15190 |
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| End bp | 16119 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642724005 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002014726 |
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| Protein GI | 194332866 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00245212 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATTTGT TCAAGAATAC AAACATAGAT TTTCTTCGCC ACAGGAAAAT TGCTTATGGG
ATTTCTCTTG TGCTGATCCT TGCCGGTATG GTTTCTCTGG CCATCCGTGG TCTCAACTTC
GGTATTGATT TCAAAGGAGG GACCGAGGCG GTGCTTCGTT TCGATCAGGA CATTTCAATC
GGAGATGTCC GATCGGTGCT CCGTGAGGCT GGTGTCCGGG GAATGGTTAA AAGCTATGGT
ACGGACCGTT CCGTCCTGAT TCAGACTGAT TTCGAGGGGG ATGTCAACCA GCTCAAGACC
ATTGTTTCTA CCGCTCTCAA CGACCGATTC AGTGATAATC CTCATGAAAT GCTGCGCATT
GATGCAGTCG GCCCCAGCAT TGCTTCAGAC CTGAAATGGG CTGCGTTGAA GGCCCTGTTA
GGTGCGCTGG TTGCCATTCT CATCTATGTC GGCATTCGCT TCGAGTTCCG GTTTGCAGCC
GCAAGCGTTG TGGCGATTTT TCATGATGTT TTTATCGTGC TGGGCCTCTT CAGTCTTCTG
GGCGGCGTAT TTGATTTCAT GCCTCTCGAT GTTGATCAGA GCATTATCGC CGCGTTTCTT
ACGATCGCCG GTTATTCGAT CAACGATACG GTTGTCGTTT ACGACAGGAT TCGCGAGAAC
GTTCTTGGCA GGAAGCCTTC GGAGTATAGC TCTATCTTCA ATGCCAGTCT CAATCAGACA
CTCAGCAGGA CAATCATCAC CTCCGGGACA ACCCTTCTGA CGGTCGCTGT CCTCTTTATT
TTTGCCGGTC CTGCTATTAG AGGTTTTTCG TTTGCTATAT TGATTGGGAT TGCCGTCGGC
ACCTACTCTT CGATATTTAT TGCTGCCCCG ATAGTGCTTG ACTGGCAGTT GAAATCCAAG
CGCCCGATCA AGCTCAGAGG GAGCAATTAG
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| Protein sequence | MHLFKNTNID FLRHRKIAYG ISLVLILAGM VSLAIRGLNF GIDFKGGTEA VLRFDQDISI
GDVRSVLREA GVRGMVKSYG TDRSVLIQTD FEGDVNQLKT IVSTALNDRF SDNPHEMLRI
DAVGPSIASD LKWAALKALL GALVAILIYV GIRFEFRFAA ASVVAIFHDV FIVLGLFSLL
GGVFDFMPLD VDQSIIAAFL TIAGYSINDT VVVYDRIREN VLGRKPSEYS SIFNASLNQT
LSRTIITSGT TLLTVAVLFI FAGPAIRGFS FAILIGIAVG TYSSIFIAAP IVLDWQLKSK
RPIKLRGSN
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