Gene Paes_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0005 
Symbol 
ID6460686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp4367 
End bp5590 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content43% 
IMG OID642723997 
Productbeta-lactamase domain protein 
Protein accessionYP_002014718 
Protein GI194332858 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0456333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC ATAAAGTACT TCCGGTTACC GACGATGTAA CGTGGATCGG AGTTCTGGAC 
CCGGGACTGG TAACATTTGA TATAGTTATG GAGACTAAGT ATGGCACTAC ATACAACTCC
TACTTTATCA ATGCAGAAAA AAAAGCTGTA GTCGAAACCA CCAAGGCAAA ATTCTGGCCA
ACCTATCTTG AAAAGATAAA ACAGGTTACA GATCCATCGG AAATTGAATA CATCATCGTT
GATCATACTG AACCGGATCA CTCAGGAAAT ATCGGCAACC TTCTGGAGGT TGCTCCTGAC
GCAACGGTCG TCGGCAGCGC AAATGCTATC AAGTTCCTTC GGGATCTGGT TGGTCGAGAA
TTCAGGTCTC TTACCGTCAA ACATGGTGAT ACACTCGATC TTGGAAACAA GACACTGCAT
TTCATCAATG CACTCAATCT GCATTGGCCT GACAGTATCT ATACGTGGAT TGAAGAGGAT
AAGGTGCTGT TTACCTGTGA CTCATTCGGC AGCCATTACT GTAATGAAGC CATGTACGAT
GATCTTTGCG GCGATTTCGA CGATGCCTTC ACCTACTACT TCGATGCGAT CCTCAGACCG
TTCAGCAAGT ATATGCTTGA TGCTATCGAA AGGATTAAAG ACCTCGATAT CAAGGTTATC
TGTCCCGGTC ACGGACCGAT TCTTCGTTCG GACTGGAAAA AATATGTTGC TCTTTCAAAA
AAATATGCTC AGGGAGCTAT TGCGCTGCCG AATGAAAAGA ATATCCTTAT CGCCTACGTC
TCAGCCTATG AGAACACCTC TCTGATGGCT GAAAAAATCG CAGAAGGCAT CCGGCCGGCT
TGTAACTTCA ATGTTGAAGT GTGTGATATA GAAGCGATGC ACTTTTCAAA AATTGAAGAA
AAAATAGCTC ACAGCAGCGC TTTGATTGTC GGTTCACCAA CCATAAACCA GAATATAGTA
CCACAGATCT ATCAGTTCTT TGGAGCTATC AATCCTATCC GGGACAGAGG TAAGCTGAGT
GCGGCCTTCG GATCATATGG CTGGAGTGGT GAAAGCACTA AAATTATCGA AACAAACTTC
ACCAATCTCA AACTCAAAGT TTTCGATAAA AATATGAAGG TTAAGTTCAA ACCACACGAA
AAAGAACTCA ACGAATGCAT TGATTTTGGT CGTGAATTTG CCAAATCACT CATCGAAAAG
AACAATCTCG TTTGTGATAT GTAG
 
Protein sequence
MTDHKVLPVT DDVTWIGVLD PGLVTFDIVM ETKYGTTYNS YFINAEKKAV VETTKAKFWP 
TYLEKIKQVT DPSEIEYIIV DHTEPDHSGN IGNLLEVAPD ATVVGSANAI KFLRDLVGRE
FRSLTVKHGD TLDLGNKTLH FINALNLHWP DSIYTWIEED KVLFTCDSFG SHYCNEAMYD
DLCGDFDDAF TYYFDAILRP FSKYMLDAIE RIKDLDIKVI CPGHGPILRS DWKKYVALSK
KYAQGAIALP NEKNILIAYV SAYENTSLMA EKIAEGIRPA CNFNVEVCDI EAMHFSKIEE
KIAHSSALIV GSPTINQNIV PQIYQFFGAI NPIRDRGKLS AAFGSYGWSG ESTKIIETNF
TNLKLKVFDK NMKVKFKPHE KELNECIDFG REFAKSLIEK NNLVCDM