Gene MARTH_orf682 details

Gene Information

• Locus tag: MARTH_orf682
• Symbol: rpsD
• ID: 6418061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycoplasma arthritidis 158L3-1
• Kingdom: Bacteria
• Replicon accession: NC_011025
• Strand: -
• Start bp: 627634
• End bp: 628236
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 4
• GC content: 33%
• IMG OID: 642715721
• Product: ribosomal protein S4
• Protein accession: YP_002000152
• Protein GI: 193216910
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.000000995603
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAT TTTTAGGATC AATTTTCAAG AAAAGTAGAC GCTATGGAAT TTCTTTACTA 
GAAAACAATA AAGAGTTTAC TAAAGGTAAA AAACGCACCA CTGCACCTGG TCAACACGGT 
GCTAGAAGAG TAAAACCTTC TGATTATCAA CTTCACTTAT ACGAAAAACA AAAAGTTAGA 
TACATGTATG GTTTAAATGA ACGTCAATTC AAACACTTAT ATTCAATCGC ATCTAAAAAA 
CAAGGTGTTA CTGGGGTTAT TTTACTTCAA ATGATTGAAT CAAGATTAGA TAATTTAGTT 
TTTAGAGCAG GCTTCGCTCG TACTAGAGCA CAAGCTCGTC AATTTGTAAA CCATGGTCAT 
TTCACAGTAG ATGGACATAA AGCTAACATT CCATCAATGG TAATTAAAGT AGGATCAGTA 
ATTGAAATGA AACCTTCGTT ACAAACTAGT CCACAAGTTA AAGATGCCGT TGAAGCAATG 
ACTGTTAGTC CATGACTAAC CAAAACCGAT TTTAAAGTTA CCTTTAATCG ACTACCAGAA 
AGAAAAGAAT TTGCTAAAGA TATTAACGAA GCATTGATCG TTGAATACTA CAACAGACGT 
TAA 

 

Protein sequence

MSRFLGSIFK KSRRYGISLL ENNKEFTKGK KRTTAPGQHG ARRVKPSDYQ LHLYEKQKVR 
YMYGLNERQF KHLYSIASKK QGVTGVILLQ MIESRLDNLV FRAGFARTRA QARQFVNHGH 
FTVDGHKANI PSMVIKVGSV IEMKPSLQTS PQVKDAVEAM TVSPWLTKTD FKVTFNRLPE 
RKEFAKDINE ALIVEYYNRR