| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MARTH_orf515 |
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| Symbol | rluD |
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| ID | 6417868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma arthritidis 158L3-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011025 |
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| Strand | - |
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| Start bp | 463823 |
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| End bp | 464719 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 4 |
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| GC content | 33% |
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| IMG OID | 642715602 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_002000038 |
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| Protein GI | 193216796 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAAA TGATTGTCAC TTATTCAGAA AGAATAGATA AATACATTGC CAATAATAGT
GAAATTACTA GAAATGATAT CCAAGCCCTA ATTGTTCAAG GTGCGGTTTT TGTTAATAGT
ACTAAAATCA ATAAAAACAA ATACATCGTT CATGAAAATG ACGAAATTGA AATAATCAAA
CTACTTGACA AACAACAAAA TATTGAAGCA CAAAACCTCC CCTTAGAAAT TGTTTACGAA
TGCGATGATT ATTTAGTAAT TAACAAACCC TCTGGCTTAG TTGTGCACCC TGCTCCAGGA
CATAGTAGCG GCACGCTTGT CAATTCTCTA ATGTATCATT TCAAAAATAA TTTAAGCGAT
GTTAATGGCC TTTTACGAAT GGGAATTGTT CATCGCATTG ATAAAGACAC TAGTGGACTC
TTATTAGTTG CTAAAAATAA CGAAACTCAT AACTACTTTG CCAAACTACT AAAAAATCAT
GAAATTAAAA GAACATATTA TGCGATTGTT GATGGTCACA TTGAAAACAG ACTAATTAAT
TTGGATCTAC CGATTGGCAG AGATCCCAAT AATAGACAAA AATTTGCCGT AACTGAGCAA
AATTCTAAAG AAGCTTTTAC TGCTTTAGAG GTAATAAAAT ATTTAAACTT GGCCGGTCAA
AATAAGACTT TAGTAAAGTG CAATTTGAAA ACTGGAAGAA CGCATCAAAT TCGTGTGCAT
TTAGCCTATA TTAAGCACCC TGTGTATGGC GATCCTGTTT ACAATAAAAA AGTTGATGAC
TTTAATCAAA GGTTGCATGC TAAAGAATTA GATTTTGTTG ACAAGAGTGG CAAGATCATG
CATTTTGAAA GCGAATTGCC CCAAATTATG CTTAACGAAC TCATGGCTAG TGAATAA
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| Protein sequence | MLKMIVTYSE RIDKYIANNS EITRNDIQAL IVQGAVFVNS TKINKNKYIV HENDEIEIIK
LLDKQQNIEA QNLPLEIVYE CDDYLVINKP SGLVVHPAPG HSSGTLVNSL MYHFKNNLSD
VNGLLRMGIV HRIDKDTSGL LLVAKNNETH NYFAKLLKNH EIKRTYYAIV DGHIENRLIN
LDLPIGRDPN NRQKFAVTEQ NSKEAFTALE VIKYLNLAGQ NKTLVKCNLK TGRTHQIRVH
LAYIKHPVYG DPVYNKKVDD FNQRLHAKEL DFVDKSGKIM HFESELPQIM LNELMASE
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