| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MARTH_orf213 |
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| Symbol | rpoC |
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| ID | 6418321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma arthritidis 158L3-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011025 |
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| Strand | + |
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| Start bp | 200998 |
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| End bp | 205392 |
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| Gene Length | 4395 bp |
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| Protein Length | 1464 aa |
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| Translation table | 4 |
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| GC content | 35% |
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| IMG OID | 642715378 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001999833 |
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| Protein GI | 193216591 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.145799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CACGTAAATA CGCCACTCTT GACAGTGACA AAATTGCTAA AATTTCGCTT
GCCTTAGCAA CTCCTGACGA TGTTGAATCA TGATCACATG GTGAAGTTAC GAAACCGGAA
ACTATTAACT ACAAAAGCTA TAAGCCTGAA CGTGGCGGTT TGTTTGATGA AATTATCTTT
GGTCCAATGA TTGACTATCG TTGTCCAATT TGTGGCCATA AGTACAAGAA AATCAACGAA
GGTAGTTTTT GCTCTAAGAC TGAACTATGT AAACAAGAAA AAGTTGAAAT TCTACCAAAA
ATCTCACGTC GTAACCACAT GGGCCACATT AAGCTAAATA GCCCGGTAGT ACATTTTTGA
TTCTTTAAAG TGGATCACTC AATTATTTTT AAATTGTTAG ATCTAACTGT AGCAGGCCGT
CCAAATACAG AGCCAGTTAG AAGAATCGAT CTTGAAAACT TAATTTACTA CAAAAGCCAC
ATTGTTCTAG AATCAGGCGG GATTAAAGCC TTGCCTAAAA ACTTAATTAT TGACATTAAT
GTTGCTGCTG TTATTTATAA AGACGCTCTA GAAGAGTTAA TCACTCGTTT TGAGCCAGGG
ACTGAAGATT ATGAAGATAT TCGCGAAACT CTTGATAACT TAATTGAAAA AGCATCTTCA
AAAATTGGTC AAGACTATGG AATTGACTTC TATGAACTAA ACGAAGTAAT CGAACATTAC
TCAGAGGCTA AAATTGGTAC TGGCGCTCAA GCAATTGAGT ACTTGCTAAA AAATCTTGAT
CTTCAAAAAG AAAAAGAACT TGTTAGTGCC AAAATTAAAA AGATTAATGA TGAAGAAATT
ATGAGCGGTG CTAAAATCGC TTCAACTTCG CGCCAAACTA GAGAAAAGTT ATATAAACGT
CTTCAAGTAA TTAATGCTTT TATTGAATCA AAACAAGAAC CAACTAGCAT GTTAATTTAT
AACTTACCAG TTATTCCCGC TGATCTTCGT CCACTAATTC AATTAGATGG TGGCCGTCAC
TCAACTTCTG ATATTAACGA ACTGTACCGC CGGGTAATTA TTAGAAATAA TCGTCTAAAA
CAATGACAAG AAAAAGACGC TCCTACTTTA GTTATTCAAA ATGAACTAAG AATGATTCAA
GAAGCAGTCG ATGCTTTAAT TGATAATGCT AGAAGATCGC CTAATCCAGT TCTTTCAAAA
GATAATCGTC CTTTTAAATC AATCAGTGAC GCTTTAACTG GTAAAAAAGG TCGTTTTAGA
CAAAACTTGC TAGGTAAACG GGTAGACTAC TCGGGACGTT CAGTTATTGT CGTTGGTCCT
AATTTAAAAA TGCACCAATG TGGTATTCCA CGGGAAATGG CCGCCAAACT TTTTGAACCT
TGAATCATTC ACCGTTTAAT TGAAAAAGAA GTGGCAACCA CAATTAAAAA TGCTAAGAAA
ATGCTAGAAG ATCAAAATCC TGTTATTTGA CCACATATCG CTGAGGTTAT TAAAGGTAGA
TTAGTTCTTC TTAACCGTGC TCCTACTTTG CATAGACTAT CAATTCAAGC TTTTGAACCT
GTCTTAGTAA GAGGAAAGGC TATTCGCTTG CACCCACTTG TATGTACTCC GTTTAACGCT
GACTTCGATG GTGACCAAAT GGCTGTTCAC GTGCCAATTT CTGAACGTGC TTTACTAGAA
AGCCGTGAAT TGATGCTTGC TAATAAAAAC ATTTTGGGAA CTAAAGATGG TGAACCAATT
ATCAACCCTT CACAAGATAT GATTTTAGGA ATCTACTATC TAACAATTGA AGAACCAGGT
GCTTTAGGAG AAGGAAGAAT TTTTGACAAT TACGAGCATA TGATTCGTGC TTATGAAGCT
AAAAAAGTTT CATTACACGC TAGAGTAGCC TTACCAATCG AAGAAGTTAA AAACTCAAAA
ATTAAGGCAT TTGCTTCACG CGAAAGTCAA AGATATATCA TCTCAACCGT AGGGAAATTC
ATTTTCAACA ATATCTTCCC AAAAAGTTTC CCATTTATTT TTGACAACAA AGTTACCGAA
GCTACCTCAC TAGAACAATA TAGTGAAAAA GTTAATAAAT ACATTATTCC GGCAGGAACC
AATGTCATTG AACACATTAA AATGGAATTG CCTGTTCTTG ATGCTTTTAA CAAGAAAAAC
ATTGCTAAAA TTATTCGTTA TGTTTTTGAT AAATATGTTG CAGCTTTAAC TCTTCAAGAT
GTTGCTGGTG TTATTGATCA ATTAAATGAT GTGCCACTTT CAAATATTGT CTTAAACTAT
TTGAACCTAA AAACTTATGA TGATCGTAAA GTTGACCAAG AACATGCCAT TATTCTAGCC
GCTCTAACAA GAAGTGCTAC TGAAAAAACT AAAGCTCGTA GTCAAAGACA TATTGAAGGC
TTAGAAGTGC CATTAAATGC TGAAGAAAAA GCTGAAATCC TAGATGATGT TTGATTTAGA
TACACTAATA TGGTTGCTTC TATTCTAGAT GATATTAAAG ATCTTGGCTT TAAATACTCT
TCACTTTCAG GAATTACCTT TGCTATTTCA GATATTTTAG AAACTGATAA AAAACCAGAA
TACATTGCTG AAGGTGATGC TTACATTGCA CAATTAAAAC AATACTATAA CGACGGACTA
ATCTCAGACG ATGACCGTTA TTCATTAACC ATTAAAAAAT GAACTGATAT TAAAGCCAAA
GTTCAAGGTG AGTTACAACA AATTATTAAA GAAAATCCTC GTAACCCAAT TATTACGATG
ATTAACTCGG GGGCAAGAGG TAATATCTCT AACTATGTTC AACTTGCTGG TATGCGGGGC
TTGATGGCAA ACAACACAAA GTCCACTCGT GCTGACGTTA AAAATGAACG GGTAGTTAGA
AGTACGGTTG AAATCCCAGT TAAATCTTCA TTTATCGAGG GACTAACGGC TTTTGAATTC
TATTCATCAA CTCACGGAAC AAGAAAGGGT GCAACTGATA CGGCACTTAA CACTGCTAAA
TCTGGTTATT TAACTAGAAG ACTAGTTGAC GTTGCACAAA ATATTGTTGT ACGTAAAGAA
AACTGTGGTT CAGACTATGG CCATATTGTT CGTGACATTG TGGACACTAA AAATGGTCAA
ATTATTGTTC CTTTAAAAGA AAGAATTATT GGTCGTTATG CTAATAAACC AATCATTGGC
GAAAAAACCA AACAAGAACT TGCTAAACGA AACACTCTAA TTACTGATAA ACTTGCCCAA
AAAATTATTG ATGAAGGCGT TAAAGAAGTT GAGATTCGTT CAGTCTTAGG CTGCAACACT
AAAAATGGCG TATGTAAGAT GTGTTTTGGA AAAGACTTGG CAACAAATAG GGTTGTTAAC
ATAGGAGAAG CAGTCGGAAT TATTGCCGCT CAATCAATTG GTGAACCAGG TACACAACTT
ACCATGCGTG TCTTCCATAC TGGTGGGGTT GCTGGTGCTG AGGATATTAC CGGTGGGTTC
CCACGGCTAA TTGAATTAAT CGATGCCCAT GAACAACCTT GAGGTCGTCC AGCGGTTATT
TCACCTTATG AAGGAGAAAT TGTTGAAGAT CTAGTAGAAG ATAAAAATGT TAACTCGCAT
TTATTAACTA TTAAAGTAGT TAACTCGAAA AAAGAAACCG TTAACAAAAA AGTTCATGTT
TACACAACTA AGAAACTAAG GGTTAAAGTT GGTGATCATG TTAAAGTTGG TCAAAAACTA
TCAGAAGGAC CAGTTATTGT CAAAGAACTT CTAGAATTAA CTGACACTAT CACCGTTCAA
AACTACTTAC TAAAAGAAAT TCAAAAAATC TATCGGATTC AAGGGATTGC CATTTCAGAT
AAATATATCG AAATTATCAT TCGCCAAATG ATGTCAAAAA TCGTTATTCA TGATCCCGGT
GATTCAAAAT TCTTTGCCGG AGCTATTGTT GACATCTTTG ACTATCAAGA AGAAAACGCA
ACTTTACTAT CACAACGTAA ACGTCCTGCA TTTGGGAAAG TTGTTATTAA AGGAGCAAAA
CAAGTACCAT TACTTTCTGA TTCATTCTTA GCAGCTGCTT CTTATCAAGA AACTTCTAAA
ATTTTGGTTC ATGCAGCAAT TTCTTCAAGA AGTGATAGCT TATCAGGGCT AAAAGAAAAT
ATTATTGTTG GTAAGAAAAT TCCTGCTGGA ACCGCGCTAT ATCCTTTTGA ATCACATTCA
AAATATGATA TTCGTCCATC AATTGATTAC TTTAGAAAAC CAGAACTAGA AACTAGTGAT
AGTGAATTTA TCCCAGTTGA TTTAGAAAGT TATCACCAAG AACTAGAAGA TGAACAACAA
CAAATTATTG AAGTTGATGA TTCAGATATT AGTGTTGAAG ATGAAGAAAA TGACTTCTAT
GAGAATGAAG ATTAG
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| Protein sequence | MKKSRKYATL DSDKIAKISL ALATPDDVES WSHGEVTKPE TINYKSYKPE RGGLFDEIIF
GPMIDYRCPI CGHKYKKINE GSFCSKTELC KQEKVEILPK ISRRNHMGHI KLNSPVVHFW
FFKVDHSIIF KLLDLTVAGR PNTEPVRRID LENLIYYKSH IVLESGGIKA LPKNLIIDIN
VAAVIYKDAL EELITRFEPG TEDYEDIRET LDNLIEKASS KIGQDYGIDF YELNEVIEHY
SEAKIGTGAQ AIEYLLKNLD LQKEKELVSA KIKKINDEEI MSGAKIASTS RQTREKLYKR
LQVINAFIES KQEPTSMLIY NLPVIPADLR PLIQLDGGRH STSDINELYR RVIIRNNRLK
QWQEKDAPTL VIQNELRMIQ EAVDALIDNA RRSPNPVLSK DNRPFKSISD ALTGKKGRFR
QNLLGKRVDY SGRSVIVVGP NLKMHQCGIP REMAAKLFEP WIIHRLIEKE VATTIKNAKK
MLEDQNPVIW PHIAEVIKGR LVLLNRAPTL HRLSIQAFEP VLVRGKAIRL HPLVCTPFNA
DFDGDQMAVH VPISERALLE SRELMLANKN ILGTKDGEPI INPSQDMILG IYYLTIEEPG
ALGEGRIFDN YEHMIRAYEA KKVSLHARVA LPIEEVKNSK IKAFASRESQ RYIISTVGKF
IFNNIFPKSF PFIFDNKVTE ATSLEQYSEK VNKYIIPAGT NVIEHIKMEL PVLDAFNKKN
IAKIIRYVFD KYVAALTLQD VAGVIDQLND VPLSNIVLNY LNLKTYDDRK VDQEHAIILA
ALTRSATEKT KARSQRHIEG LEVPLNAEEK AEILDDVWFR YTNMVASILD DIKDLGFKYS
SLSGITFAIS DILETDKKPE YIAEGDAYIA QLKQYYNDGL ISDDDRYSLT IKKWTDIKAK
VQGELQQIIK ENPRNPIITM INSGARGNIS NYVQLAGMRG LMANNTKSTR ADVKNERVVR
STVEIPVKSS FIEGLTAFEF YSSTHGTRKG ATDTALNTAK SGYLTRRLVD VAQNIVVRKE
NCGSDYGHIV RDIVDTKNGQ IIVPLKERII GRYANKPIIG EKTKQELAKR NTLITDKLAQ
KIIDEGVKEV EIRSVLGCNT KNGVCKMCFG KDLATNRVVN IGEAVGIIAA QSIGEPGTQL
TMRVFHTGGV AGAEDITGGF PRLIELIDAH EQPWGRPAVI SPYEGEIVED LVEDKNVNSH
LLTIKVVNSK KETVNKKVHV YTTKKLRVKV GDHVKVGQKL SEGPVIVKEL LELTDTITVQ
NYLLKEIQKI YRIQGIAISD KYIEIIIRQM MSKIVIHDPG DSKFFAGAIV DIFDYQEENA
TLLSQRKRPA FGKVVIKGAK QVPLLSDSFL AAASYQETSK ILVHAAISSR SDSLSGLKEN
IIVGKKIPAG TALYPFESHS KYDIRPSIDY FRKPELETSD SEFIPVDLES YHQELEDEQQ
QIIEVDDSDI SVEDEENDFY ENED
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