Gene Rpal_R0046 details

Gene Information

• Locus tag: Rpal_R0046
• ID: 6412606
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 5290246
• End bp: 5293072
• Gene Length: 2827 bp
• GC content: 54%
• IMG OID: 642714797
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AATCAAGTGC CTTAAGGGTG TTCGACGGAT GCCTTGGCGC TGAGAGGCGA TGAAGGACGT 
GCTACGCTGC GATAAGCCAT GGGGAGCTGC GAAGAAGCTT TGATCCGTGG ATTTCCGAAT 
GGGGAAACCC ACCTTCGATA GCCGGAACTC CAAGGCCTTG CGTTTCGAAA GAGACGTGAG 
GGTTTGGATT TCCGGTTATC AAGAGAAGGT ATGAGATCTC TGAATACATA GGAGGTTTCA 
AGCGAACCCA GGGAACTGAA ACATCTAAGT ACCTGGAGGA AAGGACATCA ACCGAGACTC 
CGCTAGTAGT GGCGAGCGAA CGCGGACCAG GCCAGTCATC ATTGGAAGAC AATTGGAATC 
TGTCAGGAAA GCAGAGCCTT AGAGGGTGAT AGCCCCGTAC AAGTAATTCA ACCATTGATG 
CTCGAGTAAG GCGGGACACG TGAAATCCTG TCTGAACATG GGGGGACCAC CCTCCAAGCC 
TAAGTACTCC TCAGCGACCG ATAGTGAACC AGTACCGTGA GGGAAAGGTG AAAAGCACCC 
CGACGAGGGG AGTGAAATAG TTCCTGAAAT CGGACACCTA CAAACAGACG GAGCCCAAGA 
TACGTTCTGG GTGACGTCGT ACCTTTTGTA TTATGGGCCA GCGACTTAAT TTAACGAGCA 
AGCTTAAGCC GGTAGGTGTA GGCGCAGCGA AAGCGAGTCT GAATAGGGCG TCAAGTTCGT 
TGGATTAGAC CCGAAACCTA GTGATCTAGC CATGAGCAGG TTGAAGGTGA GGTAACACTC 
ACTGGAGGAC CGAACGGGTG CCTGTTGAAA AAGGCTCCGA TGACTTGTGG TTAGGGGTGA 
AAGGCCAATC AAACTGGGAA ATAGCTGGTT CTCCGCGAAA GATATTTAGG TATCGCCTCG 
GACGAATACC TCAGGGGGTA GAGCACTGGA TGGGCTAGGG GGACTTACCG TCTTACCAAA 
CCCAACCAAA CTCCGAATAC CTGAGAGTAC TATCCGGGAG TCACACGGCG GGTGCTAACG 
TCCGTCGTGG AGAGGGAAAC AACCCTGACC TACAGCTAAG GCCCCCAATT CGTGGCTAAG 
TGGGAAAGGA TGTGGAAATC CCAAAACAAC CAGGAGGTTG GCTTAGAAGC AGCCATCCTT 
TAAAGAAAGC GTAACAGCTC ACTGGTCTAA ATAAGGGTTT CTGCGCCGAA GATGTAACGG 
GGCTCAAGCC ACGAGCCGAA GCTTAGGGTG TGCGCAAGCA CGCGGTAGCG GAGCGTTCTG 
TAAGCCTGCG AAGGGCGACC CGTGAGGGCG CCTGGAGGTA TCAGAAGTGC GAATGCTGGC 
ATGAGTAACG ACAAACACTG TGAAAGACAG TGTCGCCGAA AGTCCAAGGG TTCCTGCGTA 
AAGTTAATCT TCGCAGGGTT AGCCGGTCCC TAAGGCGAGG CCGAAAGGCG TAGTCGATGG 
GAATCACGTG AATATTCGTG AGCCAGTGGA TGGTGACGAA TCCCTTATGT TGTTCGACCT 
TACTGGATTG GTCGGGCCTC GACGGGGTTC CAGGAAATAG CCTCCACATC AGACCGTACC 
CGAAACCGAC ACAGGTGGAC TGGTAGAGTA TACCAAGGCG CTTGAGAGAA CTATGTTGAA 
GGAACTCGGC AATTTACCTC CGTAACTTCG GGATAAGGAG GCCTTCTGTT TGCGCAAGCA 
GGCAGGAGGG GCACAGACCA GGGGGTGGCA ACTGTTTAAC AAAAACACAG GGCTCTGCGA 
AATCGCAAGA TGACGTATAG GGTCTGACGC CTGCCCGGTG CCGGAAGGTT AAGAGGAGGA 
GTGCAAGCTC TGAATTGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT 
AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAATGA CTTCCCCGCT 
GTCTCCAACA TAGACTCAGT GAAATTGAAT TCCCCGTGAA GATGCGGGGT TCCTGCGGTC 
AGACGGAAAG ACCCCGTGCA CCTTTACTGT AGCTTTGCGC TGGTATTCGT GACTGTTTGT 
GTAGAATAGG TGGTAGGCTT TGAAGCTCGG GCGCCAGCTC GGGTGGAGCC GCAATGTGAA 
ATACCACCCT AATGGTTATG GATATCTAAC CGCGATCCCT TATCGGGTTC CGGGACAGCG 
CATGGTGGGC AGTTTGACTG GGGCGGTCGC CTCCCAAAGA GTAACGGAGG CGTGCGACGG 
TAGGCTCAGA ACGGTCGGAA ATCGTTCGTC GAGTACAATG GCATAAGCCT GCCTGACTGC 
GAGACCAACA AGTCGAGCAG AGACGAAAGT CGGTCATAGT GATCCCGGTG GTCCCGCGTG 
GATGGGCCAT CGCTCAACGG ATAAAAGGTA CGCCGGGGAT AACAGGCTGA TGACGCCCAA 
GAGTCCATAT CGACGGCGTC GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG 
GAGAAGGTCC CAAGGGTTCG GCTGTTCGCC GATTAAAGTG GTACGTGAGC TGGGTTCAGA 
ACGTCGTGAG ACAGTTCGGT CCCTATCTGC CGTGGGTGTT GGAATGTTGA GAGGATTTGC 
CCCTAGTACG AGAGGACCGG GGTGAACGTA CCTCTGGTGG AGCTGTTGTC GCGCCAGCGG 
CAGTGCAGCA TAGCTATGTA CGGACGGGAT AACCGCTGAA AGCATCTAAG CGGGAAACCC 
ACCTCAAAAC GAGCATTCCC TTGAGAACCG TGGAAGACGA CCACGTTGAT AGGCCGGATG 
TGGAAGTGCA GCAATGCATG TAGCTTACCG GTACTAATCG TTCGATTGGC TTGATTGCTC 
TCATTAT 

 

Protein sequence