| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5316 |
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| Symbol | |
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| ID | 6413017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5736341 |
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| End bp | 5737927 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715205 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001994277 |
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| Protein GI | 192293672 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.924286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAGC TCATCGAGGC ACCGGGCGTG GTAACGCCAT TCGACGGAAT GGACGTGCCG
TGGCTGCTGA AACTGCACGC CGAGGCGCGC CGCGAGCATC CGTTCGTGAT CTGGTCGCCA
TTCGACGGCC CGTCGCGAAG CTGGAGCTAC GGCGAATTTC ACGACCGCGT CGGCGCGCTC
GCCGCGGGCC TGGCACGGCG CGGCATCAAG CAGGGCGATT ACCTGCTGAT TCATCTCGAC
AATTGCGTCG AATTCCTGCT CGCCTGGTTC GCCTGCACGG AGCTGGGAGC GATCGCGGTC
ACCACCAACA CCCGCTCGGC CGCCGCGGAG ATCGAGTACT TCGCCGACCA TTGCGGGGCG
GTCGCCGCCA TCACTCAGCC GGCCTATGCC GATCTGGTGG CCGCCAATTG CAAGAAGCTG
AAATGGATGG CGGTGATCGG ACACGATCCC GGCGCGGCGA TCGCCGCGCA GCCGGTCGCA
AAGGGCCACT CGTTCGACAG CCTGTTTGGC GACAGCGCCG ACCGGCCGCA CCGCCGGACC
GATCCGCTGG CGCCGTGCAG CGTGCAATAC ACCTCCGGCA CCACGTCGCG GCCCAAGGCG
GTGCTGTGGA CCCACGCCAA CGCACTGTGG GGCGCCAAGA TCAACGCCGC ACACCAAACG
CTGCGCGCCG ATGACGTGCA TCTGTTGTAT CTGCCGCTGT TCCACACCAA TGCGCTGGCC
TATTCGATGC TGTCGACGCT GTGGGTCGGC GGCACTGTCG TGGTCCAGCC GCGGTTCTCG
GCGAGCCGCT TCTGGAAGGT CTCGCTGGAG CATGGCTGCA CCTGGCTGTC GACGATCCCG
TTCTGCATGA AGGCGCTGCT CGAGCACGAG GTCCCGAAGG CGCATCGCTT CCGGCTGTGG
GGCAGCGCGG TCGCCGAACC GCCGCCGTTC GCCTCGTTCG GCATCAAGAT CATCGGCTGG
TGGGGCATGA CCGAGACCAT CACCCACGGC ATCATCGCAG AAGCCGATCA GCCCAACACG
CCGATGTCGA TCGGCCGCGC TGCGCCCGAA TACGCGATCC GCATCGTCGG CGACGACGGC
GCCCCGACAC GCGTCGGCGA CACCGGCAAT CTGCTGATCA AAGGCGTGCC GGGCCTGTCG
CTGTTCAAGG AGTATCTCCA CAACGAGGCG GCAACGCGCG ACAGCTTCGA CGAGCACGGT
TACTTCATCA CCGGCGACCG CGTCACACGG CTCGAGCACG GCGCGATTCG GTTCGGCGAC
CGCGCCAAGG ACATGCTGAA AGTCGGCGGC GAGAACGTCG CGGCCTCCGA GATCGAGCAG
GTGGTGATCA CCGTGCCCGG CGTACGCGAG GCCGCGGTGG TGGCCAAGAA GCACCCGATG
CTCGACGAAG TGCCGGTGGT GTTCGTGATT CCGCAAGGCG GCGTTGCCGC GGCGCCGCCG
GATTTCGTCG ACCGCATCAC CGCCGCCTGC ACGGCCGCGC TCGCGGACTT CAAGCGGCCG
CGCGAAGTGC GGCTGGTCGA CGACATGCCG CGCTCAACGC TGGAGAAGGT GGCGAAAGCC
GAACTCCGCA AGATGTTAGC GGACTAA
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| Protein sequence | MSQLIEAPGV VTPFDGMDVP WLLKLHAEAR REHPFVIWSP FDGPSRSWSY GEFHDRVGAL
AAGLARRGIK QGDYLLIHLD NCVEFLLAWF ACTELGAIAV TTNTRSAAAE IEYFADHCGA
VAAITQPAYA DLVAANCKKL KWMAVIGHDP GAAIAAQPVA KGHSFDSLFG DSADRPHRRT
DPLAPCSVQY TSGTTSRPKA VLWTHANALW GAKINAAHQT LRADDVHLLY LPLFHTNALA
YSMLSTLWVG GTVVVQPRFS ASRFWKVSLE HGCTWLSTIP FCMKALLEHE VPKAHRFRLW
GSAVAEPPPF ASFGIKIIGW WGMTETITHG IIAEADQPNT PMSIGRAAPE YAIRIVGDDG
APTRVGDTGN LLIKGVPGLS LFKEYLHNEA ATRDSFDEHG YFITGDRVTR LEHGAIRFGD
RAKDMLKVGG ENVAASEIEQ VVITVPGVRE AAVVAKKHPM LDEVPVVFVI PQGGVAAAPP
DFVDRITAAC TAALADFKRP REVRLVDDMP RSTLEKVAKA ELRKMLAD
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