Gene Rpal_5302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5302 
Symbol 
ID6413003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5722443 
End bp5724329 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content63% 
IMG OID642715191 
Productheat shock protein 90 
Protein accessionYP_001994263 
Protein GI192293658 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA CTGATACCGC CAGCGAGACG AAGCCGTTCC AGGCCGAAGT GGCCGAGCTT 
TTGAACCTGA TGGTGCACTC GGTCTATTCC GAGACCGACA TCTTCCTGCG CGAGCTGATT
TCGAACGCGT CCGACGCGCT TGACAAGCTG CGCTACGAGT CGATCGCAAA GCCCGAGCTG
ATGGAAAAGG GCGGCGAACC GAAGATCCGT ATCATTCCCA AGAAGGCGCC CGACACCCTG
ACGATTGTCG ATAACGGCAT CGGCATGGAC CGCCAGGAGC TGATCGACAA TCTCGGCACC
ATCGCCAAGT CCGGCACCAA ATCCTTCATT TCCAAGCTTG CCGAGACCAA GGACAGTGCC
GGCCTGATCG GCCAATTCGG CGTCGGCTTT TACGCCGCCT TCATGGTGGC CGATAAGATC
ACCGTTACCA GCCGCCGCGC CGGCTCGGAC GACGTCTGGA CCTGGACGTC CGCCGGCGGT
GCCGGCTTCG AGATCGCTCC GGCGTCCGAA GAAGCCGCCG CGCGGGTCGA GCGCGGCACC
GAGATCGTGC TGCATCTGAA GCCGGACGCG TCGAAATATC TCGAAGACTG GCAGATCGAG
CGGATCGTCA CCGAGTATTC CGACAACATC CAGTTCCCGA TCGAGCTGGT GCCGGAAGAA
GGCGAGCCTC GCCAGATCAA CTCGGCCAGC GCGCTGTGGC AGCGCTCGAA GTCGGAGCTG
AGTGAGGACG ACTACAAGCA GGCCTACAAG CAGATCGCGG GCGCGTTCGA CGAGCCGGCG
ATGACGCTGC ATTATCGCGC CGAGGGTCGG CAATCCTACG CTGTGCTGCT GTTCGCGCCG
TCCACCAAGC CGTTCGATCT GTTCGAGCCG GAGCGCAAGG GCAAGATCAA GCTCTACGTC
CGCCGCGTCT TCATCACCTC GGAAGCCGAG CTGCTGCCGC CTTACCTACG CTTCCTGCGC
GGCGTGATCG ATTCCGAGGA TCTGCCGCTC AACCTGTCGC GCGAGATGCT GCAGAAGAAT
CCGCAGCTCG CGCAGATCCG CACCGCGGTG ACCGGCAAGG TGATCAGCGA GCTGGAAAGC
CTCGCCGACA AGAAGCCGGA GGACTTCACC AAGATCTGGG ATGCGTTCGG CCCGGTGCTG
AAGGAAGGCT TGTACGAGGA TTTCGAGCGC CGCGAAAAGC TGCTGTCGCT GGCGCGCTTC
ACCACCACGG CCGGCGAGAA GCGTTCGCTG AAGCAATATG TCGAGGCGAT GAAGGAGAAT
CAGACCGAGA TCTACTATCT GGTCGGCGAC TCGCTGGAGC GGCTGAAGTC CAACCCGAAG
CTGGAATCGG CCACCGCGCG CGGCATCGAA GTGCTGCTGC TGACCGATCC GGTCGATGCG
TTCTGGACCT CCGGGCAACT CGATTTCGGC GGCAAGCCGC TGAAATCGCT GAGCCAGGGC
GATGTCAATT TCGATCTGAT CCCGAAGCTT GAGCAGGACC AGGACAAGGA CAACAAGGAC
GAGGCAAAGG CCGACGAGGC GACCGTGATC GCGGTGATCA AGGACGCGCT CGGTGAGCGC
GTCTCCGACG TCAAAGCCTC GCAGCGGCTG ACGTCGAGCG CCTCGTGTCT GGTCGCGGGC
GGCATGGGGC CGGATCGCGA GCTCGAGAAG CTGCTGGCGC GCGCTAACAA GGGCGCAGGC
TCCAAGCCGA TCCTCGAGAT CAATCTGCAG CATCCGCTGG TCGCGGCGCT CGGCGATACC
AAGACCGACA AGGCGGAAGC CGCCGATCTT GCTTTCCTGC TGCTCGAGCA GGCGCAGATC
CTCGACGGCG AACTGCCCGA AGACCCCGCC GCCTTCGCCA GCCGGCTCAA TCGGCTGGTG
CTGCGTGGCG TGGTTGCGCA TGGTTAG
 
Protein sequence
MTMTDTASET KPFQAEVAEL LNLMVHSVYS ETDIFLRELI SNASDALDKL RYESIAKPEL 
MEKGGEPKIR IIPKKAPDTL TIVDNGIGMD RQELIDNLGT IAKSGTKSFI SKLAETKDSA
GLIGQFGVGF YAAFMVADKI TVTSRRAGSD DVWTWTSAGG AGFEIAPASE EAAARVERGT
EIVLHLKPDA SKYLEDWQIE RIVTEYSDNI QFPIELVPEE GEPRQINSAS ALWQRSKSEL
SEDDYKQAYK QIAGAFDEPA MTLHYRAEGR QSYAVLLFAP STKPFDLFEP ERKGKIKLYV
RRVFITSEAE LLPPYLRFLR GVIDSEDLPL NLSREMLQKN PQLAQIRTAV TGKVISELES
LADKKPEDFT KIWDAFGPVL KEGLYEDFER REKLLSLARF TTTAGEKRSL KQYVEAMKEN
QTEIYYLVGD SLERLKSNPK LESATARGIE VLLLTDPVDA FWTSGQLDFG GKPLKSLSQG
DVNFDLIPKL EQDQDKDNKD EAKADEATVI AVIKDALGER VSDVKASQRL TSSASCLVAG
GMGPDRELEK LLARANKGAG SKPILEINLQ HPLVAALGDT KTDKAEAADL AFLLLEQAQI
LDGELPEDPA AFASRLNRLV LRGVVAHG