| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5297 |
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| Symbol | |
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| ID | 6412998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5715128 |
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| End bp | 5717593 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642715186 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001994258 |
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| Protein GI | 192293653 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGCGCG CGCTGTGGAT CCTCGCCGTG CTGCTGAGCC ACTGGCGACG GCATCCGATG
CAGCTTGCGA CCCTGGCGAT CGGCCTGATC TCCGCGACCG CCTTGTGGAG CGGCGTGCAG
GCGTTGAACG CGCAGGCCCG CACGAGTTAC GACCGCGCCG CCGCGGCGCT CGGCGGCAAT
CGCACCGCAA CGTTGGTGGC GCGTGACGGC GGCAACTTCT CCCAGCAGCT CTATGTCGAC
CTGCGCCGCG CCGGCTGGCA GGTGTCTCCG GCGGTCGAAG GCGCGATCCG GATTAGCGGC
CGGTCGCTGC GGCTACTCGG CGTCGAGCCA CTATCGCTGC CGGTCGAAGC CCGCACCGCG
CCAGCGCTCG GCACGGGCGA TCTGCAGGGC TTCATTCTGC CGCCGGGCCA GACGCTGATC
GCGCCGGAGA CGCTGCGCGA CTTCAGCCTC GCCGAAGGCG CGACGCCGGA GCTGCCGAAC
GGCCAGCATC TGCCGCCGCT GAAGCCACAA GCGGAGATCG CGCCCGGCGT GCTGGTGGTC
GACATCGGCA TCGCGCAGAA ACTGCTCGAC ATGCCGCACC GGCTGTCGCG GCTGCTGCTC
GGCAGCAAGC CAAGCGGTTC GCGCCCGCCG CTCCGCGACA TCGTCGACGA CAAGCTGCAG
CTCGATCAGC CGGATGCCGC TACTGAGCTT GAGCGCCTCA CCGACAGCTT CCACCTCAAC
CTGACAGCGT TCGGTCTGCT ATCGTTCCTG GTCGGATTGT TCATCGTCAA TTCGGCGATC
GGGCTCGCGT TCGAGCAGCG CCGCCCGATG CTGCGCACCT TGCGTGCCTG CGGCGCCTCG
GCGCGCCAGC TCAACGCCGT GATGGTAATC GAGCTGTGCC TGATCGCGCT GCTCGCCGGC
CTGATCGGTC TCGTCTGCGG CTATCTGATC GCCGCGACGC TGCTGCCCGA CGTCGCCGCC
ACCTTGCGGG GCCTGTACGG CGCGCAGATT CCCGGTGAGC TGTCGCTGCG GCCGCAATGG
TGGCTCGCCG GCATCGCCAT CAGCATTCTC GGCACGCTCG CCGCCGCGTC CACGGCGCTG
ATCAAGGCGG CAAGGCTGCC GGTGCTGGTC GCCGCGCAGC CTTATGCGTG GCAGCAGGCG
CAGTATCGCT GGCTGCTCGT GCAGGGCGTG GCTGCGCTCG CGGTGTTCGC CGCTGGTTTC
GGCTTTCTGT GGTTCGGCGA TTCGCTGCTA TCGGGCTTTG CGGTGTTGGC CGCGATCCTG
CTCGGCGCCG CGCTCGGGCT GCCGGCGATC CTCGGGCTGG TGCTGGCGCT CGGCGAGAAG
CTGGCGCGGG GACCGCTGAC GAGCTGGATC TGGGCCGACA GCCGGCTGCA GCTCTCCGGC
CTCTCCCTGG CACTGATGGC GCTGCTGCTG GCGCTCGGCG TCAATGTCGG CGTCGGCACC
ATGGTGGAGA GCTTCAGCCG CACCTTCCAG CGCTGGCTCG ACGGCCGGCT CGCCGCGGAG
GTCTATCTCA ATGCCGCCAG CGACCAACAG GCGACCGAGA TCAAGGCTTG GCTGAAAGGC
CGTCCCGAAG TTACCTCGCT GCTTCCGGGC GCGCGCGCCG AAGTGAAGCT GCAGGGCCAG
CCGGTTGAGC TGATCGGATT CGCCGACGAT GCCACGTATC GCGATCACTG GCCGCTGCTC
GAGCACACCA AAGATGTCTG GGACCGCGTC GCGCGCGGCG ATGCGGCACT GGTCAGCGAA
CAGCTGTGGC GCCGGCTCGG CGTCAAGCTC GGTGACCGCA TCGTGGTGCC GAGCGACCGC
GGCCCGTGGC CGGTCGAGGT GGTGGGGATC TATGCCGACT ATGGCAATCC GCGCGGCCAG
CTCGGCATCG CGTTCGGCGC GCTGGTGACG CATTTCCCCG ATGTGGCCAA GACGAGGTTC
GGGCTGCGGG TAGATCCCGC ACGGGTGCCG GCCCTGATCG CCGACCTGCG CAACAGCTTC
GCGCTCGGGG AGCGGAGCCT CGCCGATCAG TCGACGTTGA AAGCGATCTC CAAACAAATC
TTCAGCCGCA CCTTCGCGGT GACCACCGCG CTCAACGCTT TCACGCTCGG CATCGCCGGC
GTGGCGCTGC TGACCAGCCT TCTGACCCTC GGTGCATCTC GGCTGCCGCA GCTCGCGCCG
CTGTGGGCGA TCGGCATCAC CCGCCGCCGG TTGGCTTTGA TCGAACTGAT GAAGACGCTG
GCGATGGCGG CGATCACCGC GCTGCTGGCA CTGCCGCTCG GCCTGCTGGT CGCGTGGTGC
CTGATCGCAG TGGTGAACGT CAAAGCATTT GGCTGGCGTC TGCCGTTCGA GGTGTTTCCG
TTCGAACTGG CAAAGCTGGT CGGCATCGCG CTGCTGGCGA CGCTGCTTGC AGCGGCGCTG
CCGATCCTGA AGCTGATGCG GATGCAGCCG GCGCGGCTGG TGAAGGTGTT TGCCGATGAA
CGCTAG
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| Protein sequence | MRRALWILAV LLSHWRRHPM QLATLAIGLI SATALWSGVQ ALNAQARTSY DRAAAALGGN
RTATLVARDG GNFSQQLYVD LRRAGWQVSP AVEGAIRISG RSLRLLGVEP LSLPVEARTA
PALGTGDLQG FILPPGQTLI APETLRDFSL AEGATPELPN GQHLPPLKPQ AEIAPGVLVV
DIGIAQKLLD MPHRLSRLLL GSKPSGSRPP LRDIVDDKLQ LDQPDAATEL ERLTDSFHLN
LTAFGLLSFL VGLFIVNSAI GLAFEQRRPM LRTLRACGAS ARQLNAVMVI ELCLIALLAG
LIGLVCGYLI AATLLPDVAA TLRGLYGAQI PGELSLRPQW WLAGIAISIL GTLAAASTAL
IKAARLPVLV AAQPYAWQQA QYRWLLVQGV AALAVFAAGF GFLWFGDSLL SGFAVLAAIL
LGAALGLPAI LGLVLALGEK LARGPLTSWI WADSRLQLSG LSLALMALLL ALGVNVGVGT
MVESFSRTFQ RWLDGRLAAE VYLNAASDQQ ATEIKAWLKG RPEVTSLLPG ARAEVKLQGQ
PVELIGFADD ATYRDHWPLL EHTKDVWDRV ARGDAALVSE QLWRRLGVKL GDRIVVPSDR
GPWPVEVVGI YADYGNPRGQ LGIAFGALVT HFPDVAKTRF GLRVDPARVP ALIADLRNSF
ALGERSLADQ STLKAISKQI FSRTFAVTTA LNAFTLGIAG VALLTSLLTL GASRLPQLAP
LWAIGITRRR LALIELMKTL AMAAITALLA LPLGLLVAWC LIAVVNVKAF GWRLPFEVFP
FELAKLVGIA LLATLLAAAL PILKLMRMQP ARLVKVFADE R
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