| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5288 |
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| Symbol | |
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| ID | 6412989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5704721 |
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| End bp | 5705968 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642715178 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001994250 |
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| Protein GI | 192293645 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.120613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGATG CGACGGCCAA CGACATCGTC GAAGACGATG CCCGTGCCCG TTCCAACGTG
GTGCGGCTGG TCGCGGCGCA GGCGCTGACC GGCGCAAACG CCGCAGTGAT TTTCGCGACC
GGTTCGATCA TCGGTGCGCA GCTCGCGCCG GAGATGTCGC TCGCGACTGT GCCGCTGTCG
ATGTACGTGC TCGGCCTTGC TGCCGGCACG CTGCCGACTG GGTGGATCGC ACGGGCTTAC
GGCCGCCGCG TCTCGTTCAT GATCGGCACC GGCTGCGGCA CGCTCACCGG CGTGCTCGGC
GCCGTCGCAA TCCTGTACGG CTCGTTCCTG CTGTTCTGCG TCGCGACGTT CATCGGCGGG
CTTTACGCCG CCGTGTCGCA GTCCTACCGG TTCGCCGCCG CCGACGGCGC CAGCGCCTCC
TATCGGCCGA AGGCGGTGTC GTGGGTGATG GCAGGCGGCG TGTTCGCCGG CGTGCTCGGT
CCGCAGCTCG TGCAGTGGAC CATGGACGTC TGGCAGCCTT ATCTGTTTGC GTTCTCCTAT
GTGGTGCAGG CGGCGATTGC GCTGATCGCC ATGGCGGTGC TGTGGGGCGT CGATGCACCG
AAGCCGAAGC CGGCGGAGCG GGCTGGCGGT CGGCCGCTGC TGGAGATCGC GCGACAGCCG
CGCTTCATCG CCGCGGCGCT GTGCGGCGCG ATCGCCTATC CGATGATGAA TTTGGTGATG
ACCTCGGCGC CGCTGGCGAT GCAGATGTGC GGGCTGAGCG TCGGCGATTC CAATTTCGGC
CTGCAATGGC ACATCGTGGC GATGTACGCG CCGAGTTTCG TCACCGGCTC GCTGATCGCC
AAGTTCGGCG CGCCGCGCGT GGTCGCGGCC GGCCTGGTCC TGGAAGCGCT CGGCGCGTCG
ATCGGCCTGC TCGGCGTCAC CGCCCCGCAC TTCTGGGCGA CGCTGTTCGT GATCGGCGTC
GGATGGAATC TGGCGTTCGT CGGCGCCTCG GCGCTGGTGC TGGAAACGCA CCAGCCGAAC
GAGAAGAACA AGGTCCAGGC GTTCAACGAC TTCATCATCT TCGGCCTGAT GGCGCTGGGG
TCGTTCTCGT CGGGCCAGCT GCTGGCGAAC TACGGCTGGA CCACCGTGAA CCTCGCGGTG
TTCCCGCCAG TGCTGCTCGG CCTGATCGTG CTGGCGATCA CCGGCTGGTC GAAAGTCCGG
AAACGGGTGG CCGAGGCCGC CACCGAACTA TCCGATCGCG GCGTCTGA
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| Protein sequence | MVDATANDIV EDDARARSNV VRLVAAQALT GANAAVIFAT GSIIGAQLAP EMSLATVPLS
MYVLGLAAGT LPTGWIARAY GRRVSFMIGT GCGTLTGVLG AVAILYGSFL LFCVATFIGG
LYAAVSQSYR FAAADGASAS YRPKAVSWVM AGGVFAGVLG PQLVQWTMDV WQPYLFAFSY
VVQAAIALIA MAVLWGVDAP KPKPAERAGG RPLLEIARQP RFIAAALCGA IAYPMMNLVM
TSAPLAMQMC GLSVGDSNFG LQWHIVAMYA PSFVTGSLIA KFGAPRVVAA GLVLEALGAS
IGLLGVTAPH FWATLFVIGV GWNLAFVGAS ALVLETHQPN EKNKVQAFND FIIFGLMALG
SFSSGQLLAN YGWTTVNLAV FPPVLLGLIV LAITGWSKVR KRVAEAATEL SDRGV
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