| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5284 |
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| Symbol | |
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| ID | 6412985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5700162 |
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| End bp | 5701301 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715174 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001994246 |
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| Protein GI | 192293641 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.245175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTCG TCCTCACTGA AGAACAAACC ATGCTGCGCG ATTCCGCGCG CGGGCTGATC
GGCGACAAGG CGCCGGTCGC TCAGTTGCGC AAGCTACGCG ACGAGCGTGA CGCCACCGGC
TTCTCGCGCG ACTTGTGGAA GAGCTTCGCC GAGATGGGCT TTGCCGGCCT GCTGGTGCCG
GAGGAGTTCG GCGGCTCGGG GCTCGGCTGC GTCGAGGCCG GCGTGGTGAT GGAGGAGATC
GGCCGCAACC TGACGCCGTC GCCGCTGCTG TCGACCGCGA TCCTGGCTGC TTCTGCATTG
GCGCGCGGCG GCTCGGAAGT GCAGAAGAAG GCTTATCTGC CGAAGATCGC CGACGGCTCG
TTGATCGCAG CGCTTGCGGT CGACGAGGGC GCCAAGCACC GGCCCGCGAA GATCGCGATG
ACCGCGACGC GCGCCGGCAA CGGCTTTCGG CTGAAGGGCG ACAAGGCGCT GGTGGTCGAT
GGCCACGTTG CCGACCTTCT GATCGTCGCG GCGCGCAGCG CCGGTCAGCC GGGCGATGCG
GATGGACTGA CGCTGTTCCT GGTCGACCCG AAGGCGAAGG GCGTTGCGAT CGAGCGCACC
GTGATGGTCG ACGCCCACAA CGCAGCGCGT ATCACTTTCG ACGACGTCGA GGTGAATGCC
GATCAGGTGC TCGGCGAGGT CGATCGCGGC GGCGCGCTGC TCGAGGTGGT ACTGAACGTC
GGCCGCGCGG CGGTTGCCGC CGAAATGCTC GGCGTCGCGG ATGAGGCGTT CGGGCGGACA
GTGAGCTATC TGAAAGAGCG TAAGCAGTTC GGAAAGCTGA TCGGCGAATT CCAGGCGCTG
CAGCACCGCG CCGCGCATCT CTACACCGAG ATCGAAATCC TTCGCGCCGC CGTGCTCAAG
GCGCTGCAGG CAGTCGATGC GGACGCCGCG CAGGCGCGGA TCGCGGTTTC GGTCGCCAAG
GCCAAGGCCG GCACGGTGAC GACGCTCGCG GTGCAGGAAG GCGTGCAGAT GCATGGCGGC
ATGGGCATGA CCGACCAGTT CGACATCGGC CTGTTCATGA AACGCGCGCG CGTTCTGCAG
GAACTGCTCG GCGACAGCGC CTACCACGCC GAAGCGCTGG CGGAGTGGAA GAAGTACTGA
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| Protein sequence | MALVLTEEQT MLRDSARGLI GDKAPVAQLR KLRDERDATG FSRDLWKSFA EMGFAGLLVP
EEFGGSGLGC VEAGVVMEEI GRNLTPSPLL STAILAASAL ARGGSEVQKK AYLPKIADGS
LIAALAVDEG AKHRPAKIAM TATRAGNGFR LKGDKALVVD GHVADLLIVA ARSAGQPGDA
DGLTLFLVDP KAKGVAIERT VMVDAHNAAR ITFDDVEVNA DQVLGEVDRG GALLEVVLNV
GRAAVAAEML GVADEAFGRT VSYLKERKQF GKLIGEFQAL QHRAAHLYTE IEILRAAVLK
ALQAVDADAA QARIAVSVAK AKAGTVTTLA VQEGVQMHGG MGMTDQFDIG LFMKRARVLQ
ELLGDSAYHA EALAEWKKY
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