Gene Rpal_5282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5282 
Symbol 
ID6412983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp5698090 
End bp5698683 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID642715172 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001994244 
Protein GI192293639 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.269288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTC CGCGCTTGTT GAGCCGGGTG GTTGCCGCGG CAGCCCTGGT CATGCTCGCT 
TCCGTGCCCA GCTACGCGCA GCAGCAGGAT GCCGGTGATG AGCCCGGGCT GATTGCCGAC 
GACGGCTACG TGCTGCCGCC GGAGTGGCAG AAACAGATGG TGTATTTCCG CACCACCGAG 
GCGCCCGGCA CCATCATCGT CCAGACCTCC GAACGCTATC TGTATCTGGT TCAGGGCAAC 
AACCGCGCGC TGCGCTACGG CATCGGCGTC GGCCGCGAAG GCTTCACGTG GCAGGGCCTC 
TTGAAGATCT CGCGGAAGGC CGAATGGCCG GATTGGGTGC CGCCGCCGGA GATGATCCAG 
CGTCAGCCCT ATCTGCCGCG CTTCATGGCC GGCGGCCCCG GCAATCCGCT CGGCGCGCGG 
GCGATGTATC TCGGCTCGAC GGTGTATCGC ATCCACGGCA CCAACCGGCC CGACACCATC 
GGCACCGCGA TTTCGTCAGG CTGCTTCCGT CTGGTCAATG CCGACGTGAT GGACCTGTAT 
GCCCGCGTCC CGGTCGGCAC CAAGGTGGTG GTCCGGCAAA GGCCCGAGCT GTAA
 
Protein sequence
MRFPRLLSRV VAAAALVMLA SVPSYAQQQD AGDEPGLIAD DGYVLPPEWQ KQMVYFRTTE 
APGTIIVQTS ERYLYLVQGN NRALRYGIGV GREGFTWQGL LKISRKAEWP DWVPPPEMIQ 
RQPYLPRFMA GGPGNPLGAR AMYLGSTVYR IHGTNRPDTI GTAISSGCFR LVNADVMDLY 
ARVPVGTKVV VRQRPEL