| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5278 |
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| Symbol | |
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| ID | 6412979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5694372 |
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| End bp | 5694983 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642715168 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001994240 |
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| Protein GI | 192293635 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAACG TCATTGCGCT CAACGACGCC GGCCGCCTGG GCATCCTCGC CGCCAGAGCC
ACGAGCGATG AAATGCTGCT CGCCAGCATT GCCAACGGTG ACCGGACTGC GATGCACACT
TTGTACGCCC GGCACAATGT GCGGGTGTAT CGCTTCATCC TGCGGATGGT GCGCGACGCC
GCGACCGCCG AAGACCTGGT CAGCCAGGTC TTCCTCGATG TGTGGCGGAC CGCACGGCAG
TTCGAGGGCC GCGCTCAGGT GTCGACCTGG CTGCTGTCGA TCGCCCGGTT CAAGGCGCTG
ACCGCGCTGC GCCAGCGCCA GCACGAAGAC ATCGACCAGG ATGACGTGCT GGAGATCGCC
GACGGTTCCG ACTCGCCGGA GACGGCACTC GACCGCAGCC GCACCAGCGA CATCCTGCGC
GCCTGCATCG CCAAACTGTC GCCGGCGCAT CGCGAGATCA TCAACCTCGT CTACTATCAT
GAGAAGTCGG TCGAAGAGGT CGGACGCATC GTCGGCATTC CGCAGAGCAC GGTGAAGACC
CGGATGTTCT ACGCCCGCAA GCAGCTTGCC GAATTGCTGA AGCGTCACGG TGTCGAAAGC
CTCGCGGCCT GA
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| Protein sequence | MQNVIALNDA GRLGILAARA TSDEMLLASI ANGDRTAMHT LYARHNVRVY RFILRMVRDA
ATAEDLVSQV FLDVWRTARQ FEGRAQVSTW LLSIARFKAL TALRQRQHED IDQDDVLEIA
DGSDSPETAL DRSRTSDILR ACIAKLSPAH REIINLVYYH EKSVEEVGRI VGIPQSTVKT
RMFYARKQLA ELLKRHGVES LAA
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