| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5277 |
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| Symbol | |
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| ID | 6412978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5693427 |
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| End bp | 5694167 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715167 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001994239 |
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| Protein GI | 192293634 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA ACCCGCACAT CATCGTCGTC GACGACGAAG CCCCGGCCCG CGAGATGGTC
GGCGACTATC TCAAGATGCA CGGCTTCGCC GTCACCCTGT GCGATGGCGG CAAGAGCCTG
CGCGCCGAGA TTGCCACCAA GCTTCCGGAC CTGGTGGTGC TGGACCTCAA CATGCCGGAA
GAGGACGGGC TGTCGATCAT CCGCGACCTC AAGGCCAAGT CCAATGTCCC GGTGATCATG
CTGACCGCGA CCGCCAGCCC GATCGACCGC GTGGTTGGCC TCGAACTCGG CGCCGACGAT
TACGTCGCCA AACCCTGCGA GCTGCGCGAA TTGATGGCGC GCATTCGTTC GGTGCTGCGC
CGCGCGGCGC CGCCGAAGCC CGTTGCCGCA GAGCCTGCAA GCGCTGCCAA GGCCGACAAC
GCCCAGCTGG TGCGGTTCGG CACCAAATGG CTCGACCTCG AAGCCCAGGC GCTGCGCGAC
GACGACGGCA ATGAGCATCC GCTGACGGCC TCTGAATTCG GTCTGCTGAA GGTGTTCGCG
GCAAATCCCA AACGGGTGCT GTCGCGCGAG CGGCTGCTGG AGCTGGCGAA CGCACGCGAC
GCCGAGGCCT TCGACCGCGC GGTCGATCTC CGCATCATGC GGATCCGCCG CAAGATCGAG
CCGGACCCGA CAAAGCCGGC CGTAATTCGG ACAATTCGCG GCGGCGGCTA TTTGTTCTCG
CCGGCCAGCG ACCGCGCCTG A
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| Protein sequence | MSQNPHIIVV DDEAPAREMV GDYLKMHGFA VTLCDGGKSL RAEIATKLPD LVVLDLNMPE
EDGLSIIRDL KAKSNVPVIM LTATASPIDR VVGLELGADD YVAKPCELRE LMARIRSVLR
RAAPPKPVAA EPASAAKADN AQLVRFGTKW LDLEAQALRD DDGNEHPLTA SEFGLLKVFA
ANPKRVLSRE RLLELANARD AEAFDRAVDL RIMRIRRKIE PDPTKPAVIR TIRGGGYLFS
PASDRA
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