| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5275 |
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| Symbol | |
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| ID | 6412976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5689640 |
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| End bp | 5691721 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715165 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001994237 |
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| Protein GI | 192293632 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCCGG TCACCCCGCA GCCCGCTGAT ACCGAGCCAC GGCCGGACCC GCGCGGCCGC
ACCGGTCTCG TCGGCCTGGT GCGCGCGGTG CCGATCCGCT GGCGCATTCT GTCCATCGCG
GCACTGAATT CACTGGTCGT GCTGGTGCTG GTGAGCCTGA TCTGGAGCGG CGCGCGGGTG
CTGCGCACCG CCTGGGACGA CGTCCGTCAG GTGCGCGAGT CCGACAAGAT CCTGGCGCTG
CTGGAAAGCG AGACTGGGCG GCTGCAGAAC CTGATCCATC GCTACATCAA TCAGCCGAGC
CCAGATCTGT TCGCCGAGAT CCTGCTGCTG CGCGAAGCGG TGCTGGGAAC GTTGACGAAC
CGCGCCTCCA CCGATCCGAT GCTGTCGGGC TCGGTCGAGG AGCTGGAGCG CGCCACCGAG
CGCTTCCTCG GCGGCTTCGG CGACCTGCGG GCGCTGCAGA CCACCATCAA GTCCACCTAC
GAAAACCAGG TGCAGGCGCC GGCCCGCGAT ATCGCTGCGC TGTTTGCGGT GATCGGCGGC
GCCACCGGGC AGCGCGACGC GCTGATCCTG CCACCGCTCG GCCGCGCCCG CGAGGCCTTC
ACCGCGATGC TGGTGGCGGC CAATTCCTAC TATCTGTCGC TGTCACAGCA GGCTGCCGAA
GAGGCGCAGC AGAACACCGA GACCATCGAG CGCACCATTC CGGTGATGAG CAGTCTCGCC
GACAACGATC TGCAAAAGAT GGCGCTGGAG AAGCTGAAGC TGCGCACCAC GGCGCTACGC
GACGGCCTGC AGGAACTGAC CGACCAACTC GCCAAGCGCA GCGATCTGTT ACGCAACTCG
ATCGATGCCA GCCAGGCTGC CACCATTGCG GCGATCGACG CGCTATCGGT GAAGATGCGC
CAGCGCGAGC AGAAGGCGCA GGAGACGTTC GACCGCACCC TCACCGGCAT TTCGCGCAAG
GTGCTGTCGA TCGCGCTGAT CTTCCTCGGC ATCATCATGA CGGCCGGCAT CATCATCGCG
CTGAGCATCC GCCTGCCGTT GCAGCAGATC TTGTCGTCGA TGCACGCCAT CACCTCGGGC
AACTACGACC GCCGCGTCGC CGGCACCGAA GCCAAGGACG AGATCGGCGC GATGGCCCGC
GCGGTCGAAG TCTTCCGCGA AAACGCGATC GACAAACGCA AGGCCGAGAA CGATCTGCGG
GAGTCGAAGG AGAAAGCCGA GAGCGCGCTG CTCGAACTGA AGACCGCGCA GCAGAATTTG
ATCGATGCCG AACGGCTGGC GGCGCTCGGC AGTCTGGTGG CCGGCGTTGC CCACGAGGTC
AACAATCCGA TCGGCATCAG CCTGACGGTG GCGTCGAGCT TCACCCGCCG CGCCACCACC
TTCGAAGCCG AGCTGAAGGG CGATACGCCG CTGCGCCGTT CGCAGCTCGA CGAATTCGTC
CGCAGTACGC GTGACGCTGC CCAGCAGCTC GTCAGCAATC TGCAACGCGC CGCCGAACTG
ATCCAATCCT TCAAGCAGGT AGCGGTCGAC CGCTCGCATG CCGAACGCCG GCAATTCAAC
CTGCACGAGG CGACCGACCA GATCGTCGCC AGCCTGAAGC CGGTGCTGAA ACGGGCGCCG
ATCCGGCTCG ATATCGACGT GCCGGAGAGC CTGGTGATCG ACGGCTACCC CGGCGCCTAC
GGGCAGATCC TGACCAACCT GTTTCTGAAC GCCGCCAACC ACGCCTTCAC CGACGGGCGA
GCCGGTACGA TCACCATCAC GGCGCGATCG CGCGGCAATG ATGATGTCGA GATCATCTTC
GCCGACGACG GCGCCGGCAT GACGCCAGAC GTGCAGCGCC AAGCCTTCGA CCCGTTCTTC
ACCACCCGCC GCAATGAGGG CGGCACGGGG CTCGGCCTGC ACATCGTTTA CAATCTGGTG
ACCCAGCAGC TCGGCGGCCG CATGATGCTG GAATCAAGAC TAGGACAAGG CACGACTTTT
CGCATTATCA TGCCGAAAAC CGCCACCGGT GGAACGGCAT CCGCCGCCCC ACCCATCGAC
GGAAACCTGC AATGGCCGAC CAGGACGATA TCCTCGAGCT GA
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| Protein sequence | MDPVTPQPAD TEPRPDPRGR TGLVGLVRAV PIRWRILSIA ALNSLVVLVL VSLIWSGARV
LRTAWDDVRQ VRESDKILAL LESETGRLQN LIHRYINQPS PDLFAEILLL REAVLGTLTN
RASTDPMLSG SVEELERATE RFLGGFGDLR ALQTTIKSTY ENQVQAPARD IAALFAVIGG
ATGQRDALIL PPLGRAREAF TAMLVAANSY YLSLSQQAAE EAQQNTETIE RTIPVMSSLA
DNDLQKMALE KLKLRTTALR DGLQELTDQL AKRSDLLRNS IDASQAATIA AIDALSVKMR
QREQKAQETF DRTLTGISRK VLSIALIFLG IIMTAGIIIA LSIRLPLQQI LSSMHAITSG
NYDRRVAGTE AKDEIGAMAR AVEVFRENAI DKRKAENDLR ESKEKAESAL LELKTAQQNL
IDAERLAALG SLVAGVAHEV NNPIGISLTV ASSFTRRATT FEAELKGDTP LRRSQLDEFV
RSTRDAAQQL VSNLQRAAEL IQSFKQVAVD RSHAERRQFN LHEATDQIVA SLKPVLKRAP
IRLDIDVPES LVIDGYPGAY GQILTNLFLN AANHAFTDGR AGTITITARS RGNDDVEIIF
ADDGAGMTPD VQRQAFDPFF TTRRNEGGTG LGLHIVYNLV TQQLGGRMML ESRLGQGTTF
RIIMPKTATG GTASAAPPID GNLQWPTRTI SSS
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