| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5267 |
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| Symbol | |
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| ID | 6412968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5680551 |
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| End bp | 5681897 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715157 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001994229 |
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| Protein GI | 192293624 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG CACCCGCGCC CGACGAGCAA GCCCGCCCGG TCCGCGAACT TGTGCTCGCT
GCTCCGCCGT CTTCGACATC GCTGCTGACG CATTGGTCCG ACCGGCTTCG TCACGCCGCA
ATCATCCTGA TCGCCGCCGC GCTCGCGCTC ACCGCCTTGG TTCTGTTCGC CCAGCTGGCG
ATCGGTCCGG CGCTCGCGGC TTTCGCCTGC CTGGTCGCAG CCGCGCTGGT GCCGTGGCGT
CTGCATGACG GTTCCAACGC GCTCGACGAC GCGCTCGGCG TCAGCCCGGT GGAAATGCCG
GTGGTGCGTG CCATCGTCGG CGGCATGCCC GATCCGGCGG TGCTGCTCGA TCGTGCCGGC
CGCGTCATTC ACCTCAATGC CGCCGCCGCA CAGCTCGCTC CGGCTCTGCG GGTGCGTGAA
CTGGCGCAGT TCGCGCTGCG CAGCCCCGAG ATCGTCACCG CGCTGCGCGA GGCGATCGCG
ACCTCGGAGC CGCGCCGCGT CACCTATCTC GATCACGGCT CGATCGAGCG CTGGCTCGAA
CTGATCATCG CGCCGGTGCA GGTGCCGACC GCGTTCGGCG GCACGGATCA GTGCATGCTG
ATGACGTTCC ACGATCTGAC GCCACTGCGT CGGGTCGAGG AGATGCGTGC TGACTTCGTC
GCCAATGCCA GCCATGAACT GCGCACGCCG CTCGCGGCCT TGTCCGGCTT CATCGACACG
CTGCAGGGCC AGGCCCGCGA TGATCCGAAG GCGCGCGAGC GTTTCCTCGG CATCATGCAC
GCTCAGGCGA CCCGGATGGC GCGGCTGATC GACGATCTGC TGTCGTTGTC GCGGGTCGAG
CTCAGCGCGC ATGTTCGTCC CGATGCGATG ATAGACCTGA AGCCGCTGAT CAAGCAGGTC
ACCGACGGCC TCGAGCCGCT GGCCAAGGAA CGCCAGGTGG TGATCGAGCT GGAGCTGCCG
GAGGATGCCG CGACCATCGC CGGCGACCGC GAAGAGCTGC TGCGGCTGTT CGAAAACCTG
ATCGAGAACG CGCTGAAATA TGGCGCCTCC GGCGGCCGCG TCGTGGTCTC GGTGGTGGCT
GCAGTGTCGG GCGACGGGGT GCCGGAATAT CGCGCGCTGG TGCGCGATTT CGGCCCCGGC
ATCGCGCCCG AGCATCTGCC CCGACTGACC GAGCGGTTCT ACCGGGTGGA CGTTGGCGAC
AGCCGTTCTC AGGGTGGTAC CGGGTTAGGA TTATCGCTGG TGAAACATAT TGTTAACCGT
CACCGCGGCC GTCTTTTGAT TGAAAGCGTG CTGAAAAAGG GCGCGACTTT CACCGTCTGC
TTTCCTCAGG GAAAGCCCCA GGTCTGA
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| Protein sequence | MTTAPAPDEQ ARPVRELVLA APPSSTSLLT HWSDRLRHAA IILIAAALAL TALVLFAQLA
IGPALAAFAC LVAAALVPWR LHDGSNALDD ALGVSPVEMP VVRAIVGGMP DPAVLLDRAG
RVIHLNAAAA QLAPALRVRE LAQFALRSPE IVTALREAIA TSEPRRVTYL DHGSIERWLE
LIIAPVQVPT AFGGTDQCML MTFHDLTPLR RVEEMRADFV ANASHELRTP LAALSGFIDT
LQGQARDDPK ARERFLGIMH AQATRMARLI DDLLSLSRVE LSAHVRPDAM IDLKPLIKQV
TDGLEPLAKE RQVVIELELP EDAATIAGDR EELLRLFENL IENALKYGAS GGRVVVSVVA
AVSGDGVPEY RALVRDFGPG IAPEHLPRLT ERFYRVDVGD SRSQGGTGLG LSLVKHIVNR
HRGRLLIESV LKKGATFTVC FPQGKPQV
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