| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5259 |
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| Symbol | argD |
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| ID | 6412960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5672526 |
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| End bp | 5673737 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715149 |
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| Product | acetylornithine transaminase protein |
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| Protein accession | YP_001994221 |
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| Protein GI | 192293616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGA GCGCTTCAAC GTCCCATCTC CTCCCGGTTT TCGCCAGAGC GGATGTCGCG
TTCGAGCGCG GAGAGGGCGT CTGGCTGCAC GGGACCGACG GTGAGCGCTA TCTGGATTTC
ACCAGCGGCG TCGCCGTCAA CGCGCTCGGC CATTGCCATC CGCATCTGGT CGAAGCCCTG
CAGCAGCAGG CGAGCAAACT GTGGCACGTC TCCAACCTGT TCAAGAGCCC GGAAGGCGAG
CGGCTGGCGG CGCGGCTTTG CGAGCAGAGC TTCGCCGACA AGGTGTTCTT CTGCAATTCG
GGCGCTGAAG CCGTCGAGTG CGCGCTGAAG ATGGCGCGGC ATTATCACTT CTCCAAGGGC
GAGCCCGAGC GGACCCGGGT GATTACTTTC GAAGGTGCGT TCCACGGCCG CACGCTCGGC
ACACTCGCCG CCACCGGCTC GGCAAAGTAC CTGGAAGGCT ACGGCCAGCC GCTCGAAGGT
TTCGACCAGC TTCCGCTCGG CGACCTCGAC GCGGTGAAGG CCGCGATCGG CCCGAACACC
GCAGCGATCC TGATCGAGCC GCTGCAGGGC GAGGGCGGCG TGCGTTCACC GGAGCTGGCG
TTCTTCCGCG GCCTGCGCGA GCTGTGCGAC GCGCACGGCC TGCTGCTGGT GTTCGACGAA
GTGCAGACCG GCATGGGCCG CACCGGCGAA CTGTTCGCCT ATAAGCGGAT CGGCGTCGCG
CCCGACATCA TGGCGCTGGC AAAAGCACTC GGCGGCGGCT TTCCGATCGG TGCCTGCCTG
TCGACTGCGG AAGCCGCGAA GGGCATGGCG CCGGGCGCGC ACGGTTCGAC CTTCGGCGGC
AATCCGCTGG CGGTCGCGGT CGCCAATGCG GTGCTCGATG TGATGCTGCA GCCGGGCTTC
TTCGACCACG TCAAGAAGAT GTCGCTGCTG CTGAAGCAGA AGCTCGCCGG CGTCGTCGAT
CGGCATCCGC GCGTCGTCAG CGAGATCCGC GGCGAGGGAT TGCTGCTCGG CCTGAAGGCC
GTCGTGCCGT CGCCCGAATT GATCGCGGCG CTGCGGGCCG AGAAGCTGCT CAGCGTCGGC
GCCGGCGATA ACGTCGTGCG CCTGCTGCCG CCGCTGATCG TCAACGAGGC TGAACTCGAC
GAGGCGGTCG GGCGACTGGA GCGCGCCTGC GTCACGCTTG CCGGACAGGC TGCGCAGAAG
GAGGCGGTGT GA
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| Protein sequence | MSQSASTSHL LPVFARADVA FERGEGVWLH GTDGERYLDF TSGVAVNALG HCHPHLVEAL
QQQASKLWHV SNLFKSPEGE RLAARLCEQS FADKVFFCNS GAEAVECALK MARHYHFSKG
EPERTRVITF EGAFHGRTLG TLAATGSAKY LEGYGQPLEG FDQLPLGDLD AVKAAIGPNT
AAILIEPLQG EGGVRSPELA FFRGLRELCD AHGLLLVFDE VQTGMGRTGE LFAYKRIGVA
PDIMALAKAL GGGFPIGACL STAEAAKGMA PGAHGSTFGG NPLAVAVANA VLDVMLQPGF
FDHVKKMSLL LKQKLAGVVD RHPRVVSEIR GEGLLLGLKA VVPSPELIAA LRAEKLLSVG
AGDNVVRLLP PLIVNEAELD EAVGRLERAC VTLAGQAAQK EAV
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