| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5258 |
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| Symbol | |
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| ID | 6412959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5671597 |
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| End bp | 5672526 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715148 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001994220 |
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| Protein GI | 192293615 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.802222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA ACATGCCGCG GCACTTCCTC GATCTCACCG AGCTGCCGAC CTCCGAACTG
CGCAACATGC TCTCCGCCGC CGTCGCCATG AAGGCGAAGC GCAAGGCGAA CGCCGATGGC
GACAAGCCGC TTGCCGGCAA GACGCTGGCG ATGATCTTCG ACAAGCCGTC GACGCGCACC
CGCGTGTCGT TCGACGTCGG CATGCGCCAG CTCGGCGGCG AGTCGATCAT GCTGACCGGC
GCCGAGATGC AGCTCGGCCG CGGCGAGACG ATCGCCGACA CCGCGCGTGT GCTGTCGCGC
TTCGTCGACA TCATCATGAT CCGCATCCTC AATCACGAGG CGCTGCTGGA GCTCGCCGCC
AACGCCACCG TGCCGGTGAT CAACGGCCTG ACCCGCAAGT CGCATCCGTG CCAGGTGATG
GCCGACGTGA TGACGTTCGA GGAGCATCGC GGCCCGATCA AGGGGCGCAC CATCGCCTGG
ACCGGCGACG ACAACAACGT GCTGGCGTCG TTCGCCCACG CCGCGCAGCG CTTCGAGTTC
AAGCTCAACA TCGCCACCCC GCCGCAGCTC TCGCCCAGCA AGGCGCTGCG CGACTGGATC
AAACAGAGCG GCGCGGCGAT CACCATCGGC ACCGATCCGG AGGAAGCCGT GCGCGGCGCC
GACTGCGTCG TCACCGACAC CTGGGTGTCG ATGGGCGACA AGGACGGCGA GCATCGCCAC
AATTTGCTCA AGCCGTATCA GGTCAACGCC AAGCTGATGT CGCTCGCCCA CAAGGACGCG
ATCTTCATGC ACTGCCTGCC GGCGCATCGC GGCGAAGAGG TCACCGACGA GGTGATCGAC
GGCCCGCAGT CGGTGGTGTT CGACGAAGCC GAAAACCGCC TGCACGCCCA AAAGGGCATC
CTGGCCTGGT GCCTCGGCGC GGTGGCGTAG
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| Protein sequence | MSNNMPRHFL DLTELPTSEL RNMLSAAVAM KAKRKANADG DKPLAGKTLA MIFDKPSTRT
RVSFDVGMRQ LGGESIMLTG AEMQLGRGET IADTARVLSR FVDIIMIRIL NHEALLELAA
NATVPVINGL TRKSHPCQVM ADVMTFEEHR GPIKGRTIAW TGDDNNVLAS FAHAAQRFEF
KLNIATPPQL SPSKALRDWI KQSGAAITIG TDPEEAVRGA DCVVTDTWVS MGDKDGEHRH
NLLKPYQVNA KLMSLAHKDA IFMHCLPAHR GEEVTDEVID GPQSVVFDEA ENRLHAQKGI
LAWCLGAVA
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