Gene Rpal_5253 details

Gene Information

• Locus tag: Rpal_5253
• ID: 6412954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 5665495
• End bp: 5666274
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642715143
• Product: hypothetical protein
• Protein accession: YP_001994215
• Protein GI: 192293610

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.209286
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGCCG TGGCGATGGC CGGCTTGAGA TGGATGGTCG CGGTAGCGCT GCTCACCGCG 
ATCGGCTTGT CGCCTCGGAC AGCCGTCGCC GAGGATGCTC CCACCTGTGT TCCGCCAGCC 
TATCTGCTGG CCAGCGAAGC CAAGCTGAAG GGCGTCGCCG CGGCGCTGAA GACCACCCAC 
AAGCTGGATA TCCTGGTGGT CGGCAGCCGC TCGTCCACCA TCCTGTCGGC CGAAAACAGC 
TCGTACCCAG GGCGATTGCA GGCCCTGCTG CGGGACCGCT TCCCGGGCGT CACCGTCAAT 
GTGATGGTCG AGATGCGGCC GAAACGGACC GCCGGCGACA TCGCCACCGG GCTGGCGGCC 
TTGGTTGCCG AGCGCAAGCC GGTGCTGGTG ATCTGGCAGA CCGGCACCTT CGATGCGATC 
CGCTCGATCG ATCCGGACGA ATTCCGCACC GCGCTGGGGC AGGGCATCGA TGCAGTCAAG 
CAGGCCGGCT CTGACATCAT CTTGATGAAT TTGCAGTATA GTCCCCGCAC CGAGACCATG 
ATCAATCCGG CGCCGTATCT CGACGCGATG CGGGTGGTGG CGCAGGAGCA CGACGTTCCG 
CTGTTCGACC GCTTCTCCAT GATGCGCCAC TGGAATGAGA CCGGCGAGTT CGATCTGTTC 
AGCCCGGCAC CGGGGATCGA TCTGGCGCTG CGCGTGCACA ACTGCCTGGC GCGCGCGCTG 
ATGGCTTTCG TCATCGAGGC TGCGCAGACC GATCCTGCGG AGGCAAGGAC CCAGCGGTAA 

 

Protein sequence

MKAVAMAGLR WMVAVALLTA IGLSPRTAVA EDAPTCVPPA YLLASEAKLK GVAAALKTTH 
KLDILVVGSR SSTILSAENS SYPGRLQALL RDRFPGVTVN VMVEMRPKRT AGDIATGLAA 
LVAERKPVLV IWQTGTFDAI RSIDPDEFRT ALGQGIDAVK QAGSDIILMN LQYSPRTETM 
INPAPYLDAM RVVAQEHDVP LFDRFSMMRH WNETGEFDLF SPAPGIDLAL RVHNCLARAL 
MAFVIEAAQT DPAEARTQR