| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5251 |
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| Symbol | |
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| ID | 6412952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5663168 |
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| End bp | 5664379 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715141 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_001994213 |
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| Protein GI | 192293608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.903252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGT CCAAACCGAC CATTCCCGTT CCCGCCACCG CGCATTTCCG CCGCGAAACC
CGCCTGGTGC ATTCCGGCAG CTTGCGCTCG CAGTTCGGCG AGACCTCCGA GGCGTTGTTC
CTGACTCAGG GCTTCGTCTA CGAAAGCGCC GAGCAGTGCG AGGCGCGCTT CACCGGCGAC
GACGCCGGCT TCCAATATTC CCGGTTCTCG AACCCGACCG TGTTCAGCTT CGAACAGCGG
ATGGCGGAGT TCGAAGGCGC AGAAGCGGCG CGCTCGACCG CCACCGGCAT GGCCGCGGTG
ACGGCCGCGA TGCTGGCGCC GCTGCGGGCA GGCGATCACG TCGTCGCCTC CAAGGCGATG
TTCGGCTCGT GCCGCTACGT CGTCGAAGAC CTGCTGCCGC GCTACGGCAT CGAGTCGACG
CTGGTCGACG GCCTCGATCT CGACCAATGG CAGCGTGCGG TCCGGCCGAA CACCAAGACA
TTCTTCCTGG AGAGCCCGAC CAACCCGACC CTCGACGTGC TCGACATCGG CGCGATCGCG
GAGATCGCCC ATGCGGCGGG CGCGCGCCTC GTGGTCGACA ACGTGTTCGC AACGCCGATC
TGGCAAAGCC CGCTGCAGCT TGGTGCCGAC GTCGTGGTTT ACTCCGCCAC CAAGCACATC
GACGGACAGG GCCGCTGTCT CGGCGGCGTG GTGCTGTCGT CGCAGGCGTT CATCGAAGAA
CACATCCAGA TGTATCTGCG CCAGACCGGC CCGTCGCTGT CGCCGTTCAA CGCCTGGGTG
CTGCTGAAGG GCCTGGAAAC GCTGGCGGTC CGTGTCGAGA AGCAGACCTC CAATGCGGCC
GCGATCGCCG ATGCGCTGGC CGGCCACCCG AAGGTGCCGC GCCTGGTTTA TCCGGGCCGG
GCCGATCACC CGCAGGCCGC GACGGTCAAG AAGCAGATGG GCGCAGGCTC GACCCTGGTC
GGCTTCGAGG TGAAGGGCGG CAAGGCCGAA GCGTTCCGCT TCCTCAATGC CCTGAAGCTG
GTGAAGATCA GCAACAATCT CGGCGACGCC AAGAGCCTCG TCACCCACCC GGCCACGACG
ACGCATCAGC GGCTGAAGCC GGAAGCGCGC GCCGAACTCG GCATCAGCGA AGGCTTCATC
CGATTGTCGG CCGGCCTCGA ACACAGAGAC GATCTGATCG AGGACCTGCT CGCCGCGCTC
GACAAGGTGT GA
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| Protein sequence | MSESKPTIPV PATAHFRRET RLVHSGSLRS QFGETSEALF LTQGFVYESA EQCEARFTGD
DAGFQYSRFS NPTVFSFEQR MAEFEGAEAA RSTATGMAAV TAAMLAPLRA GDHVVASKAM
FGSCRYVVED LLPRYGIEST LVDGLDLDQW QRAVRPNTKT FFLESPTNPT LDVLDIGAIA
EIAHAAGARL VVDNVFATPI WQSPLQLGAD VVVYSATKHI DGQGRCLGGV VLSSQAFIEE
HIQMYLRQTG PSLSPFNAWV LLKGLETLAV RVEKQTSNAA AIADALAGHP KVPRLVYPGR
ADHPQAATVK KQMGAGSTLV GFEVKGGKAE AFRFLNALKL VKISNNLGDA KSLVTHPATT
THQRLKPEAR AELGISEGFI RLSAGLEHRD DLIEDLLAAL DKV
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